Hb_010369_020

Information

Type -
Description -
Location Contig10369: 29091-30302
Sequence    

Annotation

kegg
ID pop:POPTR_0006s04940g
description POPTRDRAFT_560504; hypothetical protein
nr
ID KDP26055.1
description hypothetical protein JCGZ_21088 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1C2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21088 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010369_020 0.0 - - hypothetical protein JCGZ_21088 [Jatropha curcas]
2 Hb_000163_020 0.0267914365 - - -
3 Hb_005306_060 0.0698077225 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Jatropha curcas]
4 Hb_074674_010 0.07568843 - - Cell division cycle protein cdt2, putative [Ricinus communis]
5 Hb_001384_030 0.088242006 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
6 Hb_061361_010 0.0886309034 - - kinase, putative [Ricinus communis]
7 Hb_023386_070 0.0886698923 - - PREDICTED: probable pectinesterase 68 [Jatropha curcas]
8 Hb_003010_050 0.0897783286 - - -
9 Hb_000025_770 0.0933094822 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
10 Hb_001205_280 0.1108609737 - - PREDICTED: probable polyol transporter 6 [Jatropha curcas]
11 Hb_046615_040 0.1114115661 - - unnamed protein product [Vitis vinifera]
12 Hb_000621_100 0.112220031 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000438_030 0.1160174742 - - -
14 Hb_000176_040 0.1167141851 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHR3 isoform X2 [Jatropha curcas]
15 Hb_010812_130 0.1202830787 - - PREDICTED: hydroxyacylglutathione hydrolase cytoplasmic [Jatropha curcas]
16 Hb_147060_010 0.1209464408 - - PREDICTED: probable glutathione S-transferase parC [Populus euphratica]
17 Hb_004197_020 0.1320135569 - - Anthocyanin 5-aromatic acyltransferase, putative [Ricinus communis]
18 Hb_033312_100 0.1346197722 - - -
19 Hb_002766_070 0.1355745847 transcription factor TF Family: MYB hypothetical protein JCGZ_17894 [Jatropha curcas]
20 Hb_005066_050 0.1366499989 - - -

Gene co-expression network

sample Hb_010369_020 Hb_010369_020 Hb_000163_020 Hb_000163_020 Hb_010369_020--Hb_000163_020 Hb_005306_060 Hb_005306_060 Hb_010369_020--Hb_005306_060 Hb_074674_010 Hb_074674_010 Hb_010369_020--Hb_074674_010 Hb_001384_030 Hb_001384_030 Hb_010369_020--Hb_001384_030 Hb_061361_010 Hb_061361_010 Hb_010369_020--Hb_061361_010 Hb_023386_070 Hb_023386_070 Hb_010369_020--Hb_023386_070 Hb_000163_020--Hb_005306_060 Hb_003010_050 Hb_003010_050 Hb_000163_020--Hb_003010_050 Hb_046615_040 Hb_046615_040 Hb_000163_020--Hb_046615_040 Hb_000163_020--Hb_074674_010 Hb_000438_030 Hb_000438_030 Hb_000163_020--Hb_000438_030 Hb_005306_060--Hb_003010_050 Hb_005306_060--Hb_046615_040 Hb_010812_130 Hb_010812_130 Hb_005306_060--Hb_010812_130 Hb_147060_010 Hb_147060_010 Hb_005306_060--Hb_147060_010 Hb_074674_010--Hb_001384_030 Hb_074674_010--Hb_023386_070 Hb_001205_280 Hb_001205_280 Hb_074674_010--Hb_001205_280 Hb_046204_010 Hb_046204_010 Hb_074674_010--Hb_046204_010 Hb_074674_010--Hb_061361_010 Hb_001384_030--Hb_001205_280 Hb_001384_030--Hb_023386_070 Hb_001384_030--Hb_046204_010 Hb_001384_030--Hb_061361_010 Hb_000025_770 Hb_000025_770 Hb_061361_010--Hb_000025_770 Hb_005066_050 Hb_005066_050 Hb_061361_010--Hb_005066_050 Hb_061361_010--Hb_001205_280 Hb_061361_010--Hb_023386_070 Hb_000621_100 Hb_000621_100 Hb_061361_010--Hb_000621_100 Hb_023386_070--Hb_001205_280 Hb_023386_070--Hb_000025_770
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.271664 0.151497 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.057531 0

CAGE analysis