Hb_000000_040

Information

Type -
Description -
Location Contig0: 37336-48635
Sequence    

Annotation

kegg
ID rcu:RCOM_1593140
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.10.2)
nr
ID XP_012071748.1
description PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Jatropha curcas]
swissprot
ID P0DH62
description Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1
trembl
ID A0A067L2V5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04364 PE=4 SV=1
Gene Ontology
ID GO:0004713
description inactive protein kinase selmodraft_444075-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00002: 39779-40306
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000000_040 0.0 - - PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Jatropha curcas]
2 Hb_020273_020 0.0463869393 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
3 Hb_006120_140 0.0510536483 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
4 Hb_005066_050 0.0773566774 - - -
5 Hb_000621_100 0.0794809762 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000321_040 0.0843598961 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Jatropha curcas]
7 Hb_008725_110 0.0888716316 - - PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas]
8 Hb_000025_770 0.1094703133 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
9 Hb_061361_010 0.1149181825 - - kinase, putative [Ricinus communis]
10 Hb_001890_040 0.1161706806 - - receptor-kinase, putative [Ricinus communis]
11 Hb_000175_210 0.1193021521 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
12 Hb_000227_020 0.1297336685 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
13 Hb_001769_150 0.139259862 - - PREDICTED: uncharacterized protein LOC105633924 [Jatropha curcas]
14 Hb_028013_030 0.1401969297 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_011063_030 0.1428607967 - - protein with unknown function [Ricinus communis]
16 Hb_001235_040 0.14809032 - - hypothetical protein POPTR_0001s47470g [Populus trichocarpa]
17 Hb_036182_010 0.1533837167 - - hypothetical protein POPTR_0473s00220g [Populus trichocarpa]
18 Hb_162378_020 0.1537623755 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 13-like [Populus euphratica]
19 Hb_007044_260 0.1589726091 - - PREDICTED: uncharacterized protein LOC105638706 isoform X1 [Jatropha curcas]
20 Hb_000358_010 0.1621441392 - - PREDICTED: basic blue protein [Populus euphratica]

Gene co-expression network

sample Hb_000000_040 Hb_000000_040 Hb_020273_020 Hb_020273_020 Hb_000000_040--Hb_020273_020 Hb_006120_140 Hb_006120_140 Hb_000000_040--Hb_006120_140 Hb_005066_050 Hb_005066_050 Hb_000000_040--Hb_005066_050 Hb_000621_100 Hb_000621_100 Hb_000000_040--Hb_000621_100 Hb_000321_040 Hb_000321_040 Hb_000000_040--Hb_000321_040 Hb_008725_110 Hb_008725_110 Hb_000000_040--Hb_008725_110 Hb_020273_020--Hb_006120_140 Hb_000175_210 Hb_000175_210 Hb_020273_020--Hb_000175_210 Hb_020273_020--Hb_000321_040 Hb_001890_040 Hb_001890_040 Hb_020273_020--Hb_001890_040 Hb_020273_020--Hb_000621_100 Hb_006120_140--Hb_000621_100 Hb_006120_140--Hb_000321_040 Hb_006120_140--Hb_001890_040 Hb_006120_140--Hb_005066_050 Hb_000025_770 Hb_000025_770 Hb_005066_050--Hb_000025_770 Hb_061361_010 Hb_061361_010 Hb_005066_050--Hb_061361_010 Hb_005066_050--Hb_000621_100 Hb_005066_050--Hb_008725_110 Hb_001205_280 Hb_001205_280 Hb_005066_050--Hb_001205_280 Hb_000621_100--Hb_000025_770 Hb_000621_100--Hb_000321_040 Hb_000621_100--Hb_061361_010 Hb_000321_040--Hb_001890_040 Hb_028013_030 Hb_028013_030 Hb_000321_040--Hb_028013_030 Hb_001235_040 Hb_001235_040 Hb_008725_110--Hb_001235_040 Hb_008725_110--Hb_020273_020 Hb_124302_010 Hb_124302_010 Hb_008725_110--Hb_124302_010 Hb_000084_230 Hb_000084_230 Hb_008725_110--Hb_000084_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.231423 0.0460229 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0301111 0

CAGE analysis