Hb_000175_210

Information

Type -
Description -
Location Contig175: 132272-133607
Sequence    

Annotation

kegg
ID rcu:RCOM_0900560
description Histidine-containing phosphotransfer protein, putative (EC:1.3.1.74)
nr
ID XP_002517639.1
description Histidine-containing phosphotransfer protein, putative [Ricinus communis]
swissprot
ID Q9SSC9
description Histidine-containing phosphotransfer protein 6 OS=Arabidopsis thaliana GN=AHP6 PE=1 SV=2
trembl
ID B9RV70
description Histidine-containing phosphotransfer protein, putative OS=Ricinus communis GN=RCOM_0900560 PE=4 SV=1
Gene Ontology
ID GO:0005634
description histidine-containing phosphotransfer protein 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16689: 133027-133789
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000175_210 0.0 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
2 Hb_020273_020 0.0771855888 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
3 Hb_001890_040 0.1087914844 - - receptor-kinase, putative [Ricinus communis]
4 Hb_000000_040 0.1193021521 - - PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Jatropha curcas]
5 Hb_124302_010 0.1250188972 - - PREDICTED: serine carboxypeptidase-like [Jatropha curcas]
6 Hb_028013_030 0.1259271445 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_006120_140 0.1314447028 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
8 Hb_000321_040 0.136026398 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Jatropha curcas]
9 Hb_008725_110 0.1546146323 - - PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas]
10 Hb_007951_080 0.1700940337 - - lactoylglutathione lyase, putative [Ricinus communis]
11 Hb_010672_040 0.1732922782 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranyl-diphosphate synthase [Hevea brasiliensis]
12 Hb_000621_100 0.1766593592 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003209_180 0.1828235324 - - Alpha-1,4 glucan phosphorylase L-2 isozyme [Morus notabilis]
14 Hb_001769_150 0.1857651579 - - PREDICTED: uncharacterized protein LOC105633924 [Jatropha curcas]
15 Hb_008132_010 0.1878866609 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]
16 Hb_001249_040 0.1896518243 - - PREDICTED: uncharacterized protein LOC105641067 [Jatropha curcas]
17 Hb_005066_050 0.1932666197 - - -
18 Hb_000816_070 0.1951438166 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000227_020 0.1994050193 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
20 Hb_001476_030 0.1998905593 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000175_210 Hb_000175_210 Hb_020273_020 Hb_020273_020 Hb_000175_210--Hb_020273_020 Hb_001890_040 Hb_001890_040 Hb_000175_210--Hb_001890_040 Hb_000000_040 Hb_000000_040 Hb_000175_210--Hb_000000_040 Hb_124302_010 Hb_124302_010 Hb_000175_210--Hb_124302_010 Hb_028013_030 Hb_028013_030 Hb_000175_210--Hb_028013_030 Hb_006120_140 Hb_006120_140 Hb_000175_210--Hb_006120_140 Hb_020273_020--Hb_000000_040 Hb_020273_020--Hb_006120_140 Hb_000321_040 Hb_000321_040 Hb_020273_020--Hb_000321_040 Hb_020273_020--Hb_001890_040 Hb_000621_100 Hb_000621_100 Hb_020273_020--Hb_000621_100 Hb_001890_040--Hb_028013_030 Hb_001890_040--Hb_006120_140 Hb_001890_040--Hb_000321_040 Hb_001890_040--Hb_000000_040 Hb_000000_040--Hb_006120_140 Hb_005066_050 Hb_005066_050 Hb_000000_040--Hb_005066_050 Hb_000000_040--Hb_000621_100 Hb_000000_040--Hb_000321_040 Hb_008725_110 Hb_008725_110 Hb_000000_040--Hb_008725_110 Hb_032223_010 Hb_032223_010 Hb_124302_010--Hb_032223_010 Hb_010672_040 Hb_010672_040 Hb_124302_010--Hb_010672_040 Hb_124302_010--Hb_008725_110 Hb_003147_020 Hb_003147_020 Hb_124302_010--Hb_003147_020 Hb_000984_230 Hb_000984_230 Hb_124302_010--Hb_000984_230 Hb_028013_030--Hb_006120_140 Hb_028013_030--Hb_020273_020 Hb_028013_030--Hb_000321_040 Hb_028013_030--Hb_000621_100 Hb_006120_140--Hb_000621_100 Hb_006120_140--Hb_000321_040 Hb_006120_140--Hb_005066_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.958294 0.0768657 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.146198 0

CAGE analysis