Hb_004375_090

Information

Type -
Description -
Location Contig4375: 64314-68195
Sequence    

Annotation

kegg
ID atr:s00129p00121180
description AMTR_s00129p00121180; hypothetical protein
nr
ID KDP28200.1
description hypothetical protein JCGZ_13971 [Jatropha curcas]
swissprot
ID O49607
description Subtilisin-like protease SBT1.6 OS=Arabidopsis thaliana GN=SBT1.6 PE=2 SV=1
trembl
ID A0A067K7I9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13971 PE=4 SV=1
Gene Ontology
ID GO:0016787
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004375_090 0.0 - - hypothetical protein JCGZ_13971 [Jatropha curcas]
2 Hb_001104_030 0.0032631395 - - PREDICTED: uncharacterized protein LOC105125581 [Populus euphratica]
3 Hb_141016_010 0.0034247285 - - hypothetical protein JCGZ_15085 [Jatropha curcas]
4 Hb_009711_060 0.0102069296 - - -
5 Hb_151697_010 0.0104684387 - - clathrin assembly protein, putative [Ricinus communis]
6 Hb_183658_010 0.0115727936 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
7 Hb_006469_100 0.0119106048 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
8 Hb_000574_060 0.0134557885 - - hypothetical protein F775_19731 [Aegilops tauschii]
9 Hb_027802_030 0.0145187751 transcription factor TF Family: HB hypothetical protein POPTR_0017s11800g [Populus trichocarpa]
10 Hb_002106_020 0.0145269461 - - PREDICTED: gibberellic acid methyltransferase 2 [Vitis vinifera]
11 Hb_000556_210 0.0171129774 - - hypothetical protein POPTR_0014s06640g [Populus trichocarpa]
12 Hb_168078_010 0.0172111905 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like, partial [Jatropha curcas]
13 Hb_003363_100 0.0202390436 - - -
14 Hb_002284_140 0.0222111985 - - hypothetical protein POPTR_0002s00800g [Populus trichocarpa]
15 Hb_000506_060 0.0225996242 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease [Malus domestica]
16 Hb_004092_020 0.0226082309 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 32 [Jatropha curcas]
17 Hb_007524_020 0.0262020922 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4 [Jatropha curcas]
18 Hb_001300_110 0.0284205067 - - PREDICTED: bidirectional sugar transporter N3-like [Jatropha curcas]
19 Hb_000243_270 0.0294510687 - - Pectinesterase-2 precursor, putative [Ricinus communis]
20 Hb_000053_140 0.0321819917 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_004375_090 Hb_004375_090 Hb_001104_030 Hb_001104_030 Hb_004375_090--Hb_001104_030 Hb_141016_010 Hb_141016_010 Hb_004375_090--Hb_141016_010 Hb_009711_060 Hb_009711_060 Hb_004375_090--Hb_009711_060 Hb_151697_010 Hb_151697_010 Hb_004375_090--Hb_151697_010 Hb_183658_010 Hb_183658_010 Hb_004375_090--Hb_183658_010 Hb_006469_100 Hb_006469_100 Hb_004375_090--Hb_006469_100 Hb_001104_030--Hb_141016_010 Hb_001104_030--Hb_009711_060 Hb_001104_030--Hb_151697_010 Hb_001104_030--Hb_183658_010 Hb_002106_020 Hb_002106_020 Hb_001104_030--Hb_002106_020 Hb_141016_010--Hb_006469_100 Hb_000574_060 Hb_000574_060 Hb_141016_010--Hb_000574_060 Hb_027802_030 Hb_027802_030 Hb_141016_010--Hb_027802_030 Hb_141016_010--Hb_009711_060 Hb_009711_060--Hb_151697_010 Hb_009711_060--Hb_183658_010 Hb_009711_060--Hb_002106_020 Hb_000556_210 Hb_000556_210 Hb_009711_060--Hb_000556_210 Hb_151697_010--Hb_183658_010 Hb_151697_010--Hb_002106_020 Hb_151697_010--Hb_000556_210 Hb_183658_010--Hb_002106_020 Hb_183658_010--Hb_000556_210 Hb_002284_140 Hb_002284_140 Hb_183658_010--Hb_002284_140 Hb_006469_100--Hb_000574_060 Hb_006469_100--Hb_027802_030 Hb_168078_010 Hb_168078_010 Hb_006469_100--Hb_168078_010 Hb_003363_100 Hb_003363_100 Hb_006469_100--Hb_003363_100 Hb_000506_060 Hb_000506_060 Hb_006469_100--Hb_000506_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.149081 0.104555 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis