Hb_183658_010

Information

Type -
Description -
Location Contig183658: 356-823
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0016301
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_183658_010 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_151697_010 0.0011044037 - - clathrin assembly protein, putative [Ricinus communis]
3 Hb_009711_060 0.0013659228 - - -
4 Hb_002106_020 0.0029543331 - - PREDICTED: gibberellic acid methyltransferase 2 [Vitis vinifera]
5 Hb_000556_210 0.0055405824 - - hypothetical protein POPTR_0014s06640g [Populus trichocarpa]
6 Hb_001104_030 0.0083097689 - - PREDICTED: uncharacterized protein LOC105125581 [Populus euphratica]
7 Hb_002284_140 0.010639396 - - hypothetical protein POPTR_0002s00800g [Populus trichocarpa]
8 Hb_004092_020 0.0110364836 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 32 [Jatropha curcas]
9 Hb_004375_090 0.0115727936 - - hypothetical protein JCGZ_13971 [Jatropha curcas]
10 Hb_141016_010 0.0149973039 - - hypothetical protein JCGZ_15085 [Jatropha curcas]
11 Hb_000053_140 0.0206119675 - - conserved hypothetical protein [Ricinus communis]
12 Hb_006469_100 0.0234822051 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
13 Hb_005663_020 0.0246876331 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
14 Hb_000574_060 0.0250271441 - - hypothetical protein F775_19731 [Aegilops tauschii]
15 Hb_001645_080 0.0252160423 transcription factor TF Family: C2H2 palmate-like pentafoliata 1 transcription factor [Manihot esculenta]
16 Hb_027802_030 0.0260899502 transcription factor TF Family: HB hypothetical protein POPTR_0017s11800g [Populus trichocarpa]
17 Hb_001488_170 0.0272138308 - - PREDICTED: transcription initiation factor IIB-like [Jatropha curcas]
18 Hb_168078_010 0.0287818643 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like, partial [Jatropha curcas]
19 Hb_000760_090 0.0306654452 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-6 [Vitis vinifera]
20 Hb_005065_090 0.0309066476 - - zinc/iron transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_183658_010 Hb_183658_010 Hb_151697_010 Hb_151697_010 Hb_183658_010--Hb_151697_010 Hb_009711_060 Hb_009711_060 Hb_183658_010--Hb_009711_060 Hb_002106_020 Hb_002106_020 Hb_183658_010--Hb_002106_020 Hb_000556_210 Hb_000556_210 Hb_183658_010--Hb_000556_210 Hb_001104_030 Hb_001104_030 Hb_183658_010--Hb_001104_030 Hb_002284_140 Hb_002284_140 Hb_183658_010--Hb_002284_140 Hb_151697_010--Hb_009711_060 Hb_151697_010--Hb_002106_020 Hb_151697_010--Hb_000556_210 Hb_151697_010--Hb_001104_030 Hb_004375_090 Hb_004375_090 Hb_151697_010--Hb_004375_090 Hb_009711_060--Hb_002106_020 Hb_009711_060--Hb_000556_210 Hb_009711_060--Hb_001104_030 Hb_009711_060--Hb_004375_090 Hb_002106_020--Hb_000556_210 Hb_002106_020--Hb_002284_140 Hb_004092_020 Hb_004092_020 Hb_002106_020--Hb_004092_020 Hb_000556_210--Hb_002284_140 Hb_000556_210--Hb_004092_020 Hb_001104_030--Hb_004375_090 Hb_141016_010 Hb_141016_010 Hb_001104_030--Hb_141016_010 Hb_001104_030--Hb_002106_020 Hb_002284_140--Hb_004092_020 Hb_000053_140 Hb_000053_140 Hb_002284_140--Hb_000053_140 Hb_002284_140--Hb_151697_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.10565 0.0783035 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis