Hb_007904_050

Information

Type -
Description -
Location Contig7904: 37914-39381
Sequence    

Annotation

kegg
ID rcu:RCOM_1082600
description signal transducer, putative
nr
ID KDP26725.1
description hypothetical protein JCGZ_17883 [Jatropha curcas]
swissprot
ID Q8H1F2
description Regulator of G-protein signaling 1 OS=Arabidopsis thaliana GN=RGS1 PE=1 SV=1
trembl
ID A0A067K3C2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17883 PE=4 SV=1
Gene Ontology
ID GO:0005634
description regulator of g-protein signaling 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007904_050 0.0 - - hypothetical protein JCGZ_17883 [Jatropha curcas]
2 Hb_115823_010 0.1161199275 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005181_020 0.1572513025 - - Pectinesterase-2 precursor, putative [Ricinus communis]
4 Hb_141199_010 0.175796702 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
5 Hb_022425_020 0.185299463 - - -
6 Hb_002942_170 0.1937490098 - - acyl carrier protein, putative [Ricinus communis]
7 Hb_173638_010 0.1989239607 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
8 Hb_003894_090 0.2163258841 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002108_020 0.2177021719 - - hypothetical protein JCGZ_16012 [Jatropha curcas]
10 Hb_004907_040 0.2341302064 - - hypothetical protein POPTR_0011s079751g, partial [Populus trichocarpa]
11 Hb_007416_380 0.2341696212 - - PREDICTED: fasciclin-like arabinogalactan protein 3 [Jatropha curcas]
12 Hb_000069_390 0.2371142324 - - PREDICTED: probable F-box protein At3g61730 [Jatropha curcas]
13 Hb_012539_090 0.2391393886 - - PREDICTED: LOW QUALITY PROTEIN: U-box domain-containing protein 26, partial [Eucalyptus grandis]
14 Hb_000107_670 0.2418109142 transcription factor TF Family: MIKC floral homeotic protein AGAMOUS [Jatropha curcas]
15 Hb_002636_140 0.2450394892 - - PREDICTED: GDSL esterase/lipase At1g71691-like [Populus euphratica]
16 Hb_007413_020 0.2497315779 - - conserved hypothetical protein [Ricinus communis]
17 Hb_027402_030 0.2555812661 - - PREDICTED: probable carboxylesterase 17 [Jatropha curcas]
18 Hb_000134_100 0.2594776634 - - PREDICTED: putative disease resistance protein RGA1 [Prunus mume]
19 Hb_002811_220 0.2648043388 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
20 Hb_001366_280 0.2757831804 - - PREDICTED: uncharacterized protein LOC105642732 [Jatropha curcas]

Gene co-expression network

sample Hb_007904_050 Hb_007904_050 Hb_115823_010 Hb_115823_010 Hb_007904_050--Hb_115823_010 Hb_005181_020 Hb_005181_020 Hb_007904_050--Hb_005181_020 Hb_141199_010 Hb_141199_010 Hb_007904_050--Hb_141199_010 Hb_022425_020 Hb_022425_020 Hb_007904_050--Hb_022425_020 Hb_002942_170 Hb_002942_170 Hb_007904_050--Hb_002942_170 Hb_173638_010 Hb_173638_010 Hb_007904_050--Hb_173638_010 Hb_003894_090 Hb_003894_090 Hb_115823_010--Hb_003894_090 Hb_115823_010--Hb_005181_020 Hb_115823_010--Hb_002942_170 Hb_115823_010--Hb_022425_020 Hb_115823_010--Hb_141199_010 Hb_005181_020--Hb_141199_010 Hb_007416_380 Hb_007416_380 Hb_005181_020--Hb_007416_380 Hb_000069_390 Hb_000069_390 Hb_005181_020--Hb_000069_390 Hb_000574_520 Hb_000574_520 Hb_005181_020--Hb_000574_520 Hb_141199_010--Hb_007416_380 Hb_141199_010--Hb_000069_390 Hb_141199_010--Hb_000574_520 Hb_183612_020 Hb_183612_020 Hb_141199_010--Hb_183612_020 Hb_002636_140 Hb_002636_140 Hb_022425_020--Hb_002636_140 Hb_002108_020 Hb_002108_020 Hb_022425_020--Hb_002108_020 Hb_001366_280 Hb_001366_280 Hb_022425_020--Hb_001366_280 Hb_012675_020 Hb_012675_020 Hb_022425_020--Hb_012675_020 Hb_022425_020--Hb_002942_170 Hb_009225_030 Hb_009225_030 Hb_022425_020--Hb_009225_030 Hb_001329_010 Hb_001329_010 Hb_002942_170--Hb_001329_010 Hb_002811_220 Hb_002811_220 Hb_002942_170--Hb_002811_220 Hb_002942_170--Hb_173638_010 Hb_002942_170--Hb_001366_280 Hb_007413_020 Hb_007413_020 Hb_173638_010--Hb_007413_020 Hb_000362_140 Hb_000362_140 Hb_173638_010--Hb_000362_140 Hb_173638_010--Hb_022425_020 Hb_173638_010--Hb_002811_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.181127 0.113557 0 0.0679387
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis