Hb_002217_370

Information

Type -
Description -
Location Contig2217: 318808-320993
Sequence    

Annotation

kegg
ID rcu:RCOM_1001340
description enzyme inhibitor, putative
nr
ID XP_012084263.1
description PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105643685 [Jatropha curcas]
swissprot
ID O49603
description Cell wall / vacuolar inhibitor of fructosidase 2 OS=Arabidopsis thaliana GN=C/VIF2 PE=1 SV=1
trembl
ID B9RZT6
description Enzyme inhibitor, putative OS=Ricinus communis GN=RCOM_1001340 PE=4 SV=1
Gene Ontology
ID GO:0004857
description cell wall vacuolar inhibitor of fructosidase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22942: 318894-319241
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002217_370 0.0 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105643685 [Jatropha curcas]
2 Hb_004586_050 0.1291922739 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
3 Hb_000331_020 0.135933163 - - cytochrome P450, putative [Ricinus communis]
4 Hb_006197_010 0.1605320703 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
5 Hb_022465_010 0.1610857437 - - hypothetical protein JCGZ_06012 [Jatropha curcas]
6 Hb_001398_110 0.162574152 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
7 Hb_000656_320 0.1700582358 - - PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like [Jatropha curcas]
8 Hb_023712_020 0.1703047913 transcription factor TF Family: ERF hypothetical protein JCGZ_20669 [Jatropha curcas]
9 Hb_001117_020 0.1703163785 - - hypothetical protein CICLE_v10008579mg [Citrus clementina]
10 Hb_000654_060 0.170950953 - - hypothetical protein CICLE_v10027550mg [Citrus clementina]
11 Hb_019429_020 0.1728080155 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_000577_050 0.1738480954 - - -
13 Hb_000045_290 0.1750964953 - - -
14 Hb_002362_010 0.179641442 - - hypothetical protein JCGZ_12328 [Jatropha curcas]
15 Hb_000756_030 0.1842392689 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
16 Hb_152528_010 0.184966749 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
17 Hb_004241_140 0.1860862156 - - S-locus lectin protein kinase family protein, putative [Theobroma cacao]
18 Hb_000371_030 0.186318746 - - PREDICTED: LOW QUALITY PROTEIN: anthocyanidin 3-O-glucosyltransferase 5 [Prunus mume]
19 Hb_003119_040 0.1882125384 - - PREDICTED: classical arabinogalactan protein 1-like [Populus euphratica]
20 Hb_057721_010 0.1934684363 - - hypothetical protein JCGZ_26658 [Jatropha curcas]

Gene co-expression network

sample Hb_002217_370 Hb_002217_370 Hb_004586_050 Hb_004586_050 Hb_002217_370--Hb_004586_050 Hb_000331_020 Hb_000331_020 Hb_002217_370--Hb_000331_020 Hb_006197_010 Hb_006197_010 Hb_002217_370--Hb_006197_010 Hb_022465_010 Hb_022465_010 Hb_002217_370--Hb_022465_010 Hb_001398_110 Hb_001398_110 Hb_002217_370--Hb_001398_110 Hb_000656_320 Hb_000656_320 Hb_002217_370--Hb_000656_320 Hb_004586_050--Hb_000331_020 Hb_004586_050--Hb_001398_110 Hb_000045_290 Hb_000045_290 Hb_004586_050--Hb_000045_290 Hb_001117_020 Hb_001117_020 Hb_004586_050--Hb_001117_020 Hb_019429_020 Hb_019429_020 Hb_004586_050--Hb_019429_020 Hb_004241_140 Hb_004241_140 Hb_004586_050--Hb_004241_140 Hb_000331_020--Hb_001398_110 Hb_000331_020--Hb_000045_290 Hb_000331_020--Hb_004241_140 Hb_000331_020--Hb_001117_020 Hb_152528_010 Hb_152528_010 Hb_000331_020--Hb_152528_010 Hb_023712_020 Hb_023712_020 Hb_006197_010--Hb_023712_020 Hb_006197_010--Hb_022465_010 Hb_137862_020 Hb_137862_020 Hb_006197_010--Hb_137862_020 Hb_057721_010 Hb_057721_010 Hb_006197_010--Hb_057721_010 Hb_000170_260 Hb_000170_260 Hb_006197_010--Hb_000170_260 Hb_006197_010--Hb_019429_020 Hb_022465_010--Hb_023712_020 Hb_022465_010--Hb_057721_010 Hb_000654_060 Hb_000654_060 Hb_022465_010--Hb_000654_060 Hb_022465_010--Hb_001398_110 Hb_177179_020 Hb_177179_020 Hb_022465_010--Hb_177179_020 Hb_001398_110--Hb_000045_290 Hb_001398_110--Hb_001117_020 Hb_001398_110--Hb_004241_140 Hb_001398_110--Hb_019429_020 Hb_005649_070 Hb_005649_070 Hb_001398_110--Hb_005649_070 Hb_001329_010 Hb_001329_010 Hb_000656_320--Hb_001329_010 Hb_006060_010 Hb_006060_010 Hb_000656_320--Hb_006060_010 Hb_000936_030 Hb_000936_030 Hb_000656_320--Hb_000936_030 Hb_013344_010 Hb_013344_010 Hb_000656_320--Hb_013344_010 Hb_000577_050 Hb_000577_050 Hb_000656_320--Hb_000577_050 Hb_014497_070 Hb_014497_070 Hb_000656_320--Hb_014497_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.71112 3.74954 2.30087 0 0.125008
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.128983 0.0507117 0 0.0205024 0

CAGE analysis