Hb_022465_010

Information

Type -
Description -
Location Contig22465: 1794-3109
Sequence    

Annotation

kegg
ID vvi:100242173
description probable leucine-rich repeat receptor-like protein kinase At1g35710
nr
ID KDP37860.1
description hypothetical protein JCGZ_06012 [Jatropha curcas]
swissprot
ID Q9FK10
description Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=2 SV=1
trembl
ID A0A067L039
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06012 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022465_010 0.0 - - hypothetical protein JCGZ_06012 [Jatropha curcas]
2 Hb_023712_020 0.0777005118 transcription factor TF Family: ERF hypothetical protein JCGZ_20669 [Jatropha curcas]
3 Hb_006197_010 0.0838202296 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
4 Hb_057721_010 0.088326371 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
5 Hb_000654_060 0.0885233798 - - hypothetical protein CICLE_v10027550mg [Citrus clementina]
6 Hb_001398_110 0.106993924 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
7 Hb_177179_020 0.108315181 - - conserved hypothetical protein [Ricinus communis]
8 Hb_137862_020 0.1146071838 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
9 Hb_022845_010 0.1153551002 - - PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Jatropha curcas]
10 Hb_000483_120 0.1198089955 transcription factor TF Family: MYB hypothetical protein POPTR_0004s12530g [Populus trichocarpa]
11 Hb_001117_020 0.1250923589 - - hypothetical protein CICLE_v10008579mg [Citrus clementina]
12 Hb_000331_020 0.1251068724 - - cytochrome P450, putative [Ricinus communis]
13 Hb_125781_010 0.1261408 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
14 Hb_019429_020 0.1265646254 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_119583_030 0.1295045855 - - unnamed protein product [Vitis vinifera]
16 Hb_000170_260 0.130315063 - - amino acid transporter, putative [Ricinus communis]
17 Hb_152528_010 0.1316097328 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
18 Hb_120289_010 0.1325518345 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
19 Hb_000056_290 0.1360456428 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000045_290 0.1376609749 - - -

Gene co-expression network

sample Hb_022465_010 Hb_022465_010 Hb_023712_020 Hb_023712_020 Hb_022465_010--Hb_023712_020 Hb_006197_010 Hb_006197_010 Hb_022465_010--Hb_006197_010 Hb_057721_010 Hb_057721_010 Hb_022465_010--Hb_057721_010 Hb_000654_060 Hb_000654_060 Hb_022465_010--Hb_000654_060 Hb_001398_110 Hb_001398_110 Hb_022465_010--Hb_001398_110 Hb_177179_020 Hb_177179_020 Hb_022465_010--Hb_177179_020 Hb_137862_020 Hb_137862_020 Hb_023712_020--Hb_137862_020 Hb_023712_020--Hb_006197_010 Hb_023712_020--Hb_057721_010 Hb_000248_080 Hb_000248_080 Hb_023712_020--Hb_000248_080 Hb_002163_070 Hb_002163_070 Hb_023712_020--Hb_002163_070 Hb_006197_010--Hb_137862_020 Hb_006197_010--Hb_057721_010 Hb_000170_260 Hb_000170_260 Hb_006197_010--Hb_000170_260 Hb_019429_020 Hb_019429_020 Hb_006197_010--Hb_019429_020 Hb_119583_030 Hb_119583_030 Hb_057721_010--Hb_119583_030 Hb_057721_010--Hb_137862_020 Hb_057721_010--Hb_002163_070 Hb_057721_010--Hb_177179_020 Hb_000025_800 Hb_000025_800 Hb_057721_010--Hb_000025_800 Hb_152528_010 Hb_152528_010 Hb_000654_060--Hb_152528_010 Hb_022845_010 Hb_022845_010 Hb_000654_060--Hb_022845_010 Hb_000756_030 Hb_000756_030 Hb_000654_060--Hb_000756_030 Hb_108744_010 Hb_108744_010 Hb_000654_060--Hb_108744_010 Hb_000654_060--Hb_001398_110 Hb_000045_290 Hb_000045_290 Hb_001398_110--Hb_000045_290 Hb_001117_020 Hb_001117_020 Hb_001398_110--Hb_001117_020 Hb_004241_140 Hb_004241_140 Hb_001398_110--Hb_004241_140 Hb_001398_110--Hb_019429_020 Hb_000331_020 Hb_000331_020 Hb_001398_110--Hb_000331_020 Hb_005649_070 Hb_005649_070 Hb_001398_110--Hb_005649_070 Hb_000483_120 Hb_000483_120 Hb_177179_020--Hb_000483_120 Hb_179367_020 Hb_179367_020 Hb_177179_020--Hb_179367_020 Hb_177179_020--Hb_119583_030 Hb_000908_030 Hb_000908_030 Hb_177179_020--Hb_000908_030 Hb_177179_020--Hb_000025_800
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.105133 0.61562 0.47506 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis