Hb_000094_030

Information

Type -
Description -
Location Contig94: 23192-23636
Sequence    

Annotation

kegg
ID cre:CHLREDRAFT_143085
description hypothetical protein
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0008253
description 5 -nucleotidase domain-containing protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_030 0.0 - - -
2 Hb_000422_070 0.2496713348 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000107_180 0.2564597231 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103343662 [Prunus mume]
4 Hb_004917_030 0.2770745005 - - -
5 Hb_004109_180 0.2818593798 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 isoform X1 [Jatropha curcas]
6 Hb_003642_020 0.2930020207 - - chlorophyll(ide) b reductase, partial [Pyrus x bretschneideri]
7 Hb_000457_190 0.2951787511 - - -
8 Hb_004088_050 0.298235223 - - hypothetical protein VITISV_027174 [Vitis vinifera]
9 Hb_028089_020 0.2996207441 - - PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
10 Hb_128196_020 0.3016650986 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Nelumbo nucifera]
11 Hb_177019_010 0.3021844912 - - Uncharacterized protein TCM_004012 [Theobroma cacao]
12 Hb_004545_180 0.308114019 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
13 Hb_000049_130 0.3132782915 - - PREDICTED: uncharacterized protein LOC104879855 [Vitis vinifera]
14 Hb_005684_010 0.3185220859 - - PREDICTED: uncharacterized protein LOC104216799 [Nicotiana sylvestris]
15 Hb_002126_010 0.3252292456 - - predicted protein [Hordeum vulgare subsp. vulgare]
16 Hb_000925_060 0.3258224641 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 9-like [Jatropha curcas]
17 Hb_001005_200 0.3294600013 - - PREDICTED: receptor-like protein kinase HERK 1 isoform X2 [Jatropha curcas]
18 Hb_050034_010 0.331287723 - - PREDICTED: cullin-1 [Jatropha curcas]
19 Hb_000556_010 0.3331350288 - - glycerate dehydrogenase, putative [Ricinus communis]
20 Hb_000442_110 0.3332958357 - - hypothetical protein POPTR_0010s18960g [Populus trichocarpa]

Gene co-expression network

sample Hb_000094_030 Hb_000094_030 Hb_000422_070 Hb_000422_070 Hb_000094_030--Hb_000422_070 Hb_000107_180 Hb_000107_180 Hb_000094_030--Hb_000107_180 Hb_004917_030 Hb_004917_030 Hb_000094_030--Hb_004917_030 Hb_004109_180 Hb_004109_180 Hb_000094_030--Hb_004109_180 Hb_003642_020 Hb_003642_020 Hb_000094_030--Hb_003642_020 Hb_000457_190 Hb_000457_190 Hb_000094_030--Hb_000457_190 Hb_004545_180 Hb_004545_180 Hb_000422_070--Hb_004545_180 Hb_001221_190 Hb_001221_190 Hb_000422_070--Hb_001221_190 Hb_001221_200 Hb_001221_200 Hb_000422_070--Hb_001221_200 Hb_009838_020 Hb_009838_020 Hb_000422_070--Hb_009838_020 Hb_001386_010 Hb_001386_010 Hb_000422_070--Hb_001386_010 Hb_000107_180--Hb_004917_030 Hb_002253_090 Hb_002253_090 Hb_000107_180--Hb_002253_090 Hb_001405_140 Hb_001405_140 Hb_000107_180--Hb_001405_140 Hb_000099_140 Hb_000099_140 Hb_000107_180--Hb_000099_140 Hb_004088_050 Hb_004088_050 Hb_000107_180--Hb_004088_050 Hb_128196_020 Hb_128196_020 Hb_004917_030--Hb_128196_020 Hb_000294_050 Hb_000294_050 Hb_004917_030--Hb_000294_050 Hb_004917_030--Hb_003642_020 Hb_004917_030--Hb_001405_140 Hb_002200_040 Hb_002200_040 Hb_004917_030--Hb_002200_040 Hb_002200_050 Hb_002200_050 Hb_004917_030--Hb_002200_050 Hb_005684_010 Hb_005684_010 Hb_004109_180--Hb_005684_010 Hb_084230_010 Hb_084230_010 Hb_004109_180--Hb_084230_010 Hb_001096_130 Hb_001096_130 Hb_004109_180--Hb_001096_130 Hb_007304_030 Hb_007304_030 Hb_004109_180--Hb_007304_030 Hb_002150_130 Hb_002150_130 Hb_004109_180--Hb_002150_130 Hb_002048_030 Hb_002048_030 Hb_004109_180--Hb_002048_030 Hb_002079_040 Hb_002079_040 Hb_003642_020--Hb_002079_040 Hb_008206_090 Hb_008206_090 Hb_003642_020--Hb_008206_090 Hb_048702_010 Hb_048702_010 Hb_003642_020--Hb_048702_010 Hb_002611_030 Hb_002611_030 Hb_003642_020--Hb_002611_030 Hb_094437_040 Hb_094437_040 Hb_003642_020--Hb_094437_040 Hb_001059_140 Hb_001059_140 Hb_003642_020--Hb_001059_140 Hb_001141_300 Hb_001141_300 Hb_000457_190--Hb_001141_300 Hb_002248_040 Hb_002248_040 Hb_000457_190--Hb_002248_040 Hb_000049_130 Hb_000049_130 Hb_000457_190--Hb_000049_130 Hb_001814_060 Hb_001814_060 Hb_000457_190--Hb_001814_060 Hb_011310_090 Hb_011310_090 Hb_000457_190--Hb_011310_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.976573 2.6912 0.228648 1.92568
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.62231 0 0.379209 1.74208

CAGE analysis