Hb_004109_180

Information

Type -
Description -
Location Contig4109: 141794-143234
Sequence    

Annotation

kegg
ID pop:POPTR_0001s40490g
description phosphate translocator-related family protein
nr
ID XP_012087691.1
description PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 isoform X1 [Jatropha curcas]
swissprot
ID Q94EI9
description Probable sugar phosphate/phosphate translocator At3g14410 OS=Arabidopsis thaliana GN=At3g14410 PE=2 SV=1
trembl
ID A0A067JL85
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25712 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable sugar phosphate phosphate translocator at3g14410

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004109_180 0.0 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 isoform X1 [Jatropha curcas]
2 Hb_005684_010 0.1910272374 - - PREDICTED: uncharacterized protein LOC104216799 [Nicotiana sylvestris]
3 Hb_084230_010 0.2220921942 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]
4 Hb_001096_130 0.2423125141 - - PREDICTED: RING-H2 finger protein ATL7-like isoform X1 [Jatropha curcas]
5 Hb_007304_030 0.257545297 - - PREDICTED: uncharacterized protein LOC105635926 isoform X2 [Jatropha curcas]
6 Hb_002150_130 0.2624084271 - - 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus communis]
7 Hb_002048_030 0.2632975529 - - PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic [Jatropha curcas]
8 Hb_000465_440 0.2641146707 - - PREDICTED: polycomb group protein EMBRYONIC FLOWER 2-like [Jatropha curcas]
9 Hb_005914_050 0.2658906136 - - PREDICTED: 50S ribosomal protein L28, chloroplastic [Jatropha curcas]
10 Hb_000096_190 0.2661071311 - - unknown [Lotus japonicus]
11 Hb_003020_210 0.2691814099 - - Structural maintenance of chromosomes 2-2 -like protein [Gossypium arboreum]
12 Hb_000962_070 0.2704886357 - - PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic isoform X2 [Jatropha curcas]
13 Hb_000500_350 0.2717039328 - - PREDICTED: uncharacterized protein LOC105649734 [Jatropha curcas]
14 Hb_001623_100 0.2725709657 - - Hydroxyethylthiazole kinase, putative [Ricinus communis]
15 Hb_003758_020 0.2739239322 - - UGTPg34 [Panax ginseng]
16 Hb_000800_020 0.2741010643 - - PREDICTED: 3-phosphoinositide-dependent protein kinase 2 [Jatropha curcas]
17 Hb_001301_330 0.2750085787 - - OTU-like cysteine protease family protein [Populus trichocarpa]
18 Hb_002759_120 0.2750689108 - - conserved hypothetical protein [Ricinus communis]
19 Hb_077549_010 0.2757820598 - - PREDICTED: uncharacterized protein LOC105644817 isoform X1 [Jatropha curcas]
20 Hb_000008_370 0.2778838515 - - PREDICTED: uncharacterized protein LOC105628095 [Jatropha curcas]

Gene co-expression network

sample Hb_004109_180 Hb_004109_180 Hb_005684_010 Hb_005684_010 Hb_004109_180--Hb_005684_010 Hb_084230_010 Hb_084230_010 Hb_004109_180--Hb_084230_010 Hb_001096_130 Hb_001096_130 Hb_004109_180--Hb_001096_130 Hb_007304_030 Hb_007304_030 Hb_004109_180--Hb_007304_030 Hb_002150_130 Hb_002150_130 Hb_004109_180--Hb_002150_130 Hb_002048_030 Hb_002048_030 Hb_004109_180--Hb_002048_030 Hb_001427_020 Hb_001427_020 Hb_005684_010--Hb_001427_020 Hb_003020_210 Hb_003020_210 Hb_005684_010--Hb_003020_210 Hb_003758_020 Hb_003758_020 Hb_005684_010--Hb_003758_020 Hb_111722_010 Hb_111722_010 Hb_005684_010--Hb_111722_010 Hb_002471_300 Hb_002471_300 Hb_005684_010--Hb_002471_300 Hb_004221_030 Hb_004221_030 Hb_084230_010--Hb_004221_030 Hb_000984_220 Hb_000984_220 Hb_084230_010--Hb_000984_220 Hb_000500_350 Hb_000500_350 Hb_084230_010--Hb_000500_350 Hb_000800_020 Hb_000800_020 Hb_084230_010--Hb_000800_020 Hb_000905_120 Hb_000905_120 Hb_084230_010--Hb_000905_120 Hb_011381_040 Hb_011381_040 Hb_084230_010--Hb_011381_040 Hb_000962_070 Hb_000962_070 Hb_001096_130--Hb_000962_070 Hb_002182_020 Hb_002182_020 Hb_001096_130--Hb_002182_020 Hb_008566_040 Hb_008566_040 Hb_001096_130--Hb_008566_040 Hb_000096_190 Hb_000096_190 Hb_001096_130--Hb_000096_190 Hb_000181_350 Hb_000181_350 Hb_001096_130--Hb_000181_350 Hb_007101_110 Hb_007101_110 Hb_001096_130--Hb_007101_110 Hb_000076_250 Hb_000076_250 Hb_007304_030--Hb_000076_250 Hb_000465_440 Hb_000465_440 Hb_007304_030--Hb_000465_440 Hb_005496_020 Hb_005496_020 Hb_007304_030--Hb_005496_020 Hb_001579_300 Hb_001579_300 Hb_007304_030--Hb_001579_300 Hb_119583_020 Hb_119583_020 Hb_007304_030--Hb_119583_020 Hb_000152_490 Hb_000152_490 Hb_007304_030--Hb_000152_490 Hb_000042_290 Hb_000042_290 Hb_002150_130--Hb_000042_290 Hb_005914_050 Hb_005914_050 Hb_002150_130--Hb_005914_050 Hb_000176_010 Hb_000176_010 Hb_002150_130--Hb_000176_010 Hb_000627_300 Hb_000627_300 Hb_002150_130--Hb_000627_300 Hb_009178_070 Hb_009178_070 Hb_002150_130--Hb_009178_070 Hb_004117_040 Hb_004117_040 Hb_002150_130--Hb_004117_040 Hb_007894_210 Hb_007894_210 Hb_002048_030--Hb_007894_210 Hb_001623_100 Hb_001623_100 Hb_002048_030--Hb_001623_100 Hb_000123_140 Hb_000123_140 Hb_002048_030--Hb_000123_140 Hb_143766_020 Hb_143766_020 Hb_002048_030--Hb_143766_020 Hb_010367_030 Hb_010367_030 Hb_002048_030--Hb_010367_030 Hb_015292_040 Hb_015292_040 Hb_002048_030--Hb_015292_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.023493 0.861621 0.630767 0.268662 0.341617
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.128983 0.507117 0 0.102512 0.510694

CAGE analysis