Hb_010367_030

Information

Type -
Description -
Location Contig10367: 14181-16703
Sequence    

Annotation

kegg
ID rcu:RCOM_1578760
description hypothetical protein
nr
ID XP_002513529.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RIG0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1578760 PE=4 SV=1
Gene Ontology
ID GO:0009987
description heat shock protein with tetratricopeptide isoform 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01382: 13328-13664 , PASA_asmbl_01383: 16400-16939
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010367_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_028207_020 0.1049533511 - - PREDICTED: uncharacterized protein LOC105650315 isoform X2 [Jatropha curcas]
3 Hb_178968_140 0.1074749175 - - PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_001328_030 0.1075862173 - - PREDICTED: nucleobase-ascorbate transporter 1 [Jatropha curcas]
5 Hb_002986_080 0.1145319739 - - PREDICTED: cyclin-dependent kinase inhibitor 7 [Jatropha curcas]
6 Hb_003861_070 0.1286766605 - - PREDICTED: uncharacterized protein LOC105650781 [Jatropha curcas]
7 Hb_065755_030 0.1346644786 - - -
8 Hb_005731_110 0.1347475822 - - PREDICTED: uncharacterized protein LOC105108367 isoform X1 [Populus euphratica]
9 Hb_002265_010 0.1363015635 - - ef-hand calcium binding protein, putative [Ricinus communis]
10 Hb_000140_440 0.1365203955 - - PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast [Jatropha curcas]
11 Hb_006555_040 0.137191798 - - PREDICTED: uncharacterized protein LOC105639405 [Jatropha curcas]
12 Hb_003581_210 0.1373230266 transcription factor TF Family: Whirly PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic [Jatropha curcas]
13 Hb_155025_010 0.1409084873 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
14 Hb_000663_020 0.1458956792 - - PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X1 [Jatropha curcas]
15 Hb_000436_100 0.1473035447 - - PREDICTED: uncharacterized protein LOC105638514 [Jatropha curcas]
16 Hb_006326_050 0.147599611 - - PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Jatropha curcas]
17 Hb_002255_040 0.1486241276 - - PREDICTED: biotin synthase [Jatropha curcas]
18 Hb_029142_030 0.1493006389 rubber biosynthesis Gene Name: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea brasiliensis]
19 Hb_001195_270 0.1511451208 - - PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X1 [Jatropha curcas]
20 Hb_004994_080 0.1524776183 - - PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_010367_030 Hb_010367_030 Hb_028207_020 Hb_028207_020 Hb_010367_030--Hb_028207_020 Hb_178968_140 Hb_178968_140 Hb_010367_030--Hb_178968_140 Hb_001328_030 Hb_001328_030 Hb_010367_030--Hb_001328_030 Hb_002986_080 Hb_002986_080 Hb_010367_030--Hb_002986_080 Hb_003861_070 Hb_003861_070 Hb_010367_030--Hb_003861_070 Hb_065755_030 Hb_065755_030 Hb_010367_030--Hb_065755_030 Hb_006326_050 Hb_006326_050 Hb_028207_020--Hb_006326_050 Hb_002255_040 Hb_002255_040 Hb_028207_020--Hb_002255_040 Hb_028207_020--Hb_065755_030 Hb_003581_210 Hb_003581_210 Hb_028207_020--Hb_003581_210 Hb_011249_030 Hb_011249_030 Hb_028207_020--Hb_011249_030 Hb_178968_140--Hb_065755_030 Hb_000663_020 Hb_000663_020 Hb_178968_140--Hb_000663_020 Hb_178968_140--Hb_001328_030 Hb_005731_110 Hb_005731_110 Hb_178968_140--Hb_005731_110 Hb_001541_050 Hb_001541_050 Hb_178968_140--Hb_001541_050 Hb_000640_160 Hb_000640_160 Hb_178968_140--Hb_000640_160 Hb_001328_030--Hb_065755_030 Hb_001328_030--Hb_003861_070 Hb_001328_030--Hb_005731_110 Hb_000105_050 Hb_000105_050 Hb_001328_030--Hb_000105_050 Hb_002986_080--Hb_028207_020 Hb_002986_080--Hb_003581_210 Hb_002986_080--Hb_003861_070 Hb_002986_080--Hb_002255_040 Hb_000424_020 Hb_000424_020 Hb_002986_080--Hb_000424_020 Hb_003861_070--Hb_065755_030 Hb_003861_070--Hb_178968_140 Hb_000390_310 Hb_000390_310 Hb_003861_070--Hb_000390_310 Hb_000287_050 Hb_000287_050 Hb_003861_070--Hb_000287_050 Hb_029142_030 Hb_029142_030 Hb_003861_070--Hb_029142_030 Hb_003760_030 Hb_003760_030 Hb_065755_030--Hb_003760_030 Hb_065755_030--Hb_005731_110 Hb_000959_220 Hb_000959_220 Hb_065755_030--Hb_000959_220 Hb_001776_060 Hb_001776_060 Hb_065755_030--Hb_001776_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.26193 2.39683 8.78878 2.75703 2.08057 2.59318
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.65508 2.21595 0.547059 0.394688 3.38645

CAGE analysis