Hb_065755_030

Information

Type -
Description -
Location Contig65755: 20385-21543
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52842: 16460-21536
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065755_030 0.0 - - -
2 Hb_178968_140 0.0707997624 - - PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 [Jatropha curcas]
3 Hb_001328_030 0.0723963137 - - PREDICTED: nucleobase-ascorbate transporter 1 [Jatropha curcas]
4 Hb_003760_030 0.0775451844 - - PREDICTED: novel plant SNARE 13 [Jatropha curcas]
5 Hb_005731_110 0.0792856499 - - PREDICTED: uncharacterized protein LOC105108367 isoform X1 [Populus euphratica]
6 Hb_000959_220 0.0811543217 - - zinc finger protein, putative [Ricinus communis]
7 Hb_001776_060 0.0812236309 - - PREDICTED: methyl-CpG-binding domain-containing protein 5-like [Jatropha curcas]
8 Hb_000287_050 0.0866539842 - - PREDICTED: uncharacterized protein LOC105637398 [Jatropha curcas]
9 Hb_032202_080 0.0867225755 - - PREDICTED: peroxisome biogenesis protein 16-like isoform X1 [Jatropha curcas]
10 Hb_077026_010 0.0869817059 - - PREDICTED: phosphatidylinositol 4-kinase alpha 2 [Jatropha curcas]
11 Hb_000640_160 0.0877095851 - - ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis]
12 Hb_011249_030 0.088610613 - - PREDICTED: uncharacterized protein LOC105641285 [Jatropha curcas]
13 Hb_000663_020 0.0887863989 - - PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X1 [Jatropha curcas]
14 Hb_002870_020 0.0932414347 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X1 [Jatropha curcas]
15 Hb_000352_350 0.0942809335 - - PREDICTED: monothiol glutaredoxin-S7, chloroplastic [Jatropha curcas]
16 Hb_005975_010 0.0943287505 - - [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase, putative [Ricinus communis]
17 Hb_000144_070 0.0947134189 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001699_210 0.0952834444 - - PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1 [Jatropha curcas]
19 Hb_007290_030 0.0978927721 transcription factor TF Family: bZIP PREDICTED: uncharacterized protein LOC105629473 [Jatropha curcas]
20 Hb_002874_180 0.0984879111 - - PREDICTED: protein AIG2-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_065755_030 Hb_065755_030 Hb_178968_140 Hb_178968_140 Hb_065755_030--Hb_178968_140 Hb_001328_030 Hb_001328_030 Hb_065755_030--Hb_001328_030 Hb_003760_030 Hb_003760_030 Hb_065755_030--Hb_003760_030 Hb_005731_110 Hb_005731_110 Hb_065755_030--Hb_005731_110 Hb_000959_220 Hb_000959_220 Hb_065755_030--Hb_000959_220 Hb_001776_060 Hb_001776_060 Hb_065755_030--Hb_001776_060 Hb_000663_020 Hb_000663_020 Hb_178968_140--Hb_000663_020 Hb_178968_140--Hb_001328_030 Hb_178968_140--Hb_005731_110 Hb_001541_050 Hb_001541_050 Hb_178968_140--Hb_001541_050 Hb_000640_160 Hb_000640_160 Hb_178968_140--Hb_000640_160 Hb_003861_070 Hb_003861_070 Hb_001328_030--Hb_003861_070 Hb_001328_030--Hb_005731_110 Hb_010367_030 Hb_010367_030 Hb_001328_030--Hb_010367_030 Hb_000105_050 Hb_000105_050 Hb_001328_030--Hb_000105_050 Hb_003119_090 Hb_003119_090 Hb_003760_030--Hb_003119_090 Hb_007007_040 Hb_007007_040 Hb_003760_030--Hb_007007_040 Hb_000751_030 Hb_000751_030 Hb_003760_030--Hb_000751_030 Hb_001501_080 Hb_001501_080 Hb_003760_030--Hb_001501_080 Hb_002485_030 Hb_002485_030 Hb_003760_030--Hb_002485_030 Hb_005731_110--Hb_000640_160 Hb_005731_110--Hb_000663_020 Hb_005731_110--Hb_000959_220 Hb_005162_110 Hb_005162_110 Hb_005731_110--Hb_005162_110 Hb_003225_020 Hb_003225_020 Hb_005731_110--Hb_003225_020 Hb_000012_270 Hb_000012_270 Hb_000959_220--Hb_000012_270 Hb_001322_020 Hb_001322_020 Hb_000959_220--Hb_001322_020 Hb_011249_030 Hb_011249_030 Hb_000959_220--Hb_011249_030 Hb_006615_050 Hb_006615_050 Hb_000959_220--Hb_006615_050 Hb_012384_030 Hb_012384_030 Hb_001776_060--Hb_012384_030 Hb_000260_680 Hb_000260_680 Hb_001776_060--Hb_000260_680 Hb_000144_070 Hb_000144_070 Hb_001776_060--Hb_000144_070 Hb_032202_080 Hb_032202_080 Hb_001776_060--Hb_032202_080 Hb_002217_110 Hb_002217_110 Hb_001776_060--Hb_002217_110 Hb_007290_030 Hb_007290_030 Hb_001776_060--Hb_007290_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.2256 6.69232 17.4863 8.22302 8.34274 6.29319
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.85091 6.85137 3.7842 3.46993 7.77514

CAGE analysis