Hb_000105_050

Information

Type -
Description -
Location Contig105: 82646-88735
Sequence    

Annotation

kegg
ID rcu:RCOM_1382770
description Inositol-tetrakisphosphate 1-kinase, putative (EC:2.7.1.134)
nr
ID XP_002522099.1
description Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis]
swissprot
ID Q10PL5
description Inositol-tetrakisphosphate 1-kinase 2 OS=Oryza sativa subsp. japonica GN=ITPK2 PE=2 SV=1
trembl
ID B9S7Y3
description Inositol-tetrakisphosphate 1-kinase OS=Ricinus communis GN=RCOM_1382770 PE=3 SV=1
Gene Ontology
ID GO:0005622
description inositol-tetrakisphosphate 1-kinase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01694: 82132-88775 , PASA_asmbl_01695: 83370-84022
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000105_050 0.0 - - Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis]
2 Hb_000181_090 0.1015135791 - - PREDICTED: protein yippee-like At5g53940 [Jatropha curcas]
3 Hb_001328_030 0.1079409998 - - PREDICTED: nucleobase-ascorbate transporter 1 [Jatropha curcas]
4 Hb_004440_020 0.1129836425 - - AP-3 complex subunit sigma-1, putative [Ricinus communis]
5 Hb_002284_150 0.1173204047 - - PREDICTED: uncharacterized protein LOC105635198 [Jatropha curcas]
6 Hb_003077_020 0.1176589579 - - ABC transporter family protein [Hevea brasiliensis]
7 Hb_000422_030 0.1196468907 - - PREDICTED: uncharacterized protein LOC105643943 [Jatropha curcas]
8 Hb_001675_300 0.1200976409 - - PREDICTED: peroxisome biogenesis protein 2 isoform X1 [Jatropha curcas]
9 Hb_000690_160 0.123861361 - - PREDICTED: uncharacterized protein LOC105121500 [Populus euphratica]
10 Hb_001269_670 0.124222444 - - PREDICTED: uncharacterized protein LOC105630287 [Jatropha curcas]
11 Hb_007885_060 0.1242246296 - - replication factor C 40 kDa family protein [Populus trichocarpa]
12 Hb_001517_050 0.1254962802 transcription factor TF Family: BBR-BPC conserved hypothetical protein [Ricinus communis]
13 Hb_171376_010 0.1259423497 - - PREDICTED: uncharacterized protein LOC105630877 isoform X1 [Jatropha curcas]
14 Hb_003848_040 0.1268096207 - - PREDICTED: phosphatidylinositol-glycan biosynthesis class X protein isoform X1 [Jatropha curcas]
15 Hb_002874_180 0.1279781142 - - PREDICTED: protein AIG2-like isoform X1 [Jatropha curcas]
16 Hb_001769_170 0.1292877734 - - 50S ribosomal protein L31, putative [Ricinus communis]
17 Hb_000365_130 0.129899094 - - PREDICTED: uncharacterized protein LOC105649044 [Jatropha curcas]
18 Hb_002316_140 0.1299167269 - - PREDICTED: rac-like GTP-binding protein 3 [Populus euphratica]
19 Hb_000599_260 0.1301225913 - - Vacuolar protein sorting-associated protein 2 like 3 [Glycine soja]
20 Hb_146673_010 0.1330688554 - - PREDICTED: tryptophan synthase alpha chain-like [Jatropha curcas]

Gene co-expression network

sample Hb_000105_050 Hb_000105_050 Hb_000181_090 Hb_000181_090 Hb_000105_050--Hb_000181_090 Hb_001328_030 Hb_001328_030 Hb_000105_050--Hb_001328_030 Hb_004440_020 Hb_004440_020 Hb_000105_050--Hb_004440_020 Hb_002284_150 Hb_002284_150 Hb_000105_050--Hb_002284_150 Hb_003077_020 Hb_003077_020 Hb_000105_050--Hb_003077_020 Hb_000422_030 Hb_000422_030 Hb_000105_050--Hb_000422_030 Hb_007885_060 Hb_007885_060 Hb_000181_090--Hb_007885_060 Hb_000424_060 Hb_000424_060 Hb_000181_090--Hb_000424_060 Hb_007533_010 Hb_007533_010 Hb_000181_090--Hb_007533_010 Hb_000181_090--Hb_002284_150 Hb_000053_110 Hb_000053_110 Hb_000181_090--Hb_000053_110 Hb_065755_030 Hb_065755_030 Hb_001328_030--Hb_065755_030 Hb_178968_140 Hb_178968_140 Hb_001328_030--Hb_178968_140 Hb_003861_070 Hb_003861_070 Hb_001328_030--Hb_003861_070 Hb_005731_110 Hb_005731_110 Hb_001328_030--Hb_005731_110 Hb_010367_030 Hb_010367_030 Hb_001328_030--Hb_010367_030 Hb_107879_010 Hb_107879_010 Hb_004440_020--Hb_107879_010 Hb_000690_160 Hb_000690_160 Hb_004440_020--Hb_000690_160 Hb_001195_460 Hb_001195_460 Hb_004440_020--Hb_001195_460 Hb_002876_220 Hb_002876_220 Hb_004440_020--Hb_002876_220 Hb_004440_020--Hb_003077_020 Hb_012022_150 Hb_012022_150 Hb_004440_020--Hb_012022_150 Hb_001517_050 Hb_001517_050 Hb_002284_150--Hb_001517_050 Hb_012340_090 Hb_012340_090 Hb_002284_150--Hb_012340_090 Hb_003213_010 Hb_003213_010 Hb_002284_150--Hb_003213_010 Hb_000300_260 Hb_000300_260 Hb_002284_150--Hb_000300_260 Hb_000649_230 Hb_000649_230 Hb_002284_150--Hb_000649_230 Hb_002946_190 Hb_002946_190 Hb_002284_150--Hb_002946_190 Hb_146673_010 Hb_146673_010 Hb_003077_020--Hb_146673_010 Hb_018133_020 Hb_018133_020 Hb_003077_020--Hb_018133_020 Hb_004157_020 Hb_004157_020 Hb_003077_020--Hb_004157_020 Hb_012114_070 Hb_012114_070 Hb_003077_020--Hb_012114_070 Hb_000599_260 Hb_000599_260 Hb_003077_020--Hb_000599_260 Hb_003728_060 Hb_003728_060 Hb_003077_020--Hb_003728_060 Hb_000422_030--Hb_000649_230 Hb_001269_640 Hb_001269_640 Hb_000422_030--Hb_001269_640 Hb_000690_190 Hb_000690_190 Hb_000422_030--Hb_000690_190 Hb_156635_010 Hb_156635_010 Hb_000422_030--Hb_156635_010 Hb_010315_060 Hb_010315_060 Hb_000422_030--Hb_010315_060 Hb_022132_050 Hb_022132_050 Hb_000422_030--Hb_022132_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.0684 3.14581 9.42447 6.18771 3.08115 5.07576
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.78963 6.47975 2.89981 0.985864 5.64305

CAGE analysis