Hb_001501_080

Information

Type -
Description -
Location Contig1501: 92830-96904
Sequence    

Annotation

kegg
ID tcc:TCM_002124
description Acid phosphatase/vanadium-dependent haloperoxidase-related protein
nr
ID XP_012080612.1
description PREDICTED: uncharacterized protein LOC105640832 isoform X1 [Jatropha curcas]
swissprot
ID O32107
description Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1
trembl
ID A0A067K704
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13721 PE=4 SV=1
Gene Ontology
ID GO:0005886
description acid phosphatase vanadium-dependent haloperoxidase-related protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12568: 92854-98032
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001501_080 0.0 - - PREDICTED: uncharacterized protein LOC105640832 isoform X1 [Jatropha curcas]
2 Hb_000751_030 0.0329206946 - - Vesicle transport protein GOT1B, putative [Ricinus communis]
3 Hb_002054_050 0.0716497801 - - PREDICTED: uncharacterized protein LOC105641285 [Jatropha curcas]
4 Hb_005463_130 0.0765149871 - - PREDICTED: polygalacturonate 4-alpha-galacturonosyltransferase [Jatropha curcas]
5 Hb_000392_230 0.0789878855 - - conserved hypothetical protein [Ricinus communis]
6 Hb_007007_040 0.0790972384 desease resistance Gene Name: ArsA_ATPase arsenical pump-driving atpase, putative [Ricinus communis]
7 Hb_003760_030 0.0801604866 - - PREDICTED: novel plant SNARE 13 [Jatropha curcas]
8 Hb_003119_090 0.0806522941 - - PREDICTED: 14-3-3 protein 6 [Jatropha curcas]
9 Hb_000879_180 0.0814451477 - - XPA-binding protein, putative [Ricinus communis]
10 Hb_011618_050 0.0820961987 - - PREDICTED: uncharacterized protein LOC105634948 [Jatropha curcas]
11 Hb_000959_230 0.0826694836 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A [Populus euphratica]
12 Hb_002836_140 0.0844346675 - - PREDICTED: uncharacterized protein C1450.15 [Jatropha curcas]
13 Hb_002783_170 0.0854790931 - - PREDICTED: BRCA1-A complex subunit BRE isoform X2 [Jatropha curcas]
14 Hb_000136_110 0.0865270841 - - hypothetical protein B456_011G031000, partial [Gossypium raimondii]
15 Hb_000414_050 0.087357014 - - hypothetical protein JCGZ_19588 [Jatropha curcas]
16 Hb_000058_130 0.08738093 - - PREDICTED: uncharacterized protein LOC105640884 [Jatropha curcas]
17 Hb_001227_130 0.0880731657 - - PREDICTED: delta(14)-sterol reductase [Jatropha curcas]
18 Hb_001804_110 0.0885551068 - - hypothetical protein CISIN_1g031200mg [Citrus sinensis]
19 Hb_058999_030 0.0893637841 - - PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Jatropha curcas]
20 Hb_000776_100 0.0897645746 - - Cleavage stimulation factor 50 kDa subunit, putative [Ricinus communis]

Gene co-expression network

sample Hb_001501_080 Hb_001501_080 Hb_000751_030 Hb_000751_030 Hb_001501_080--Hb_000751_030 Hb_002054_050 Hb_002054_050 Hb_001501_080--Hb_002054_050 Hb_005463_130 Hb_005463_130 Hb_001501_080--Hb_005463_130 Hb_000392_230 Hb_000392_230 Hb_001501_080--Hb_000392_230 Hb_007007_040 Hb_007007_040 Hb_001501_080--Hb_007007_040 Hb_003760_030 Hb_003760_030 Hb_001501_080--Hb_003760_030 Hb_000751_030--Hb_000392_230 Hb_000751_030--Hb_007007_040 Hb_000776_100 Hb_000776_100 Hb_000751_030--Hb_000776_100 Hb_011618_050 Hb_011618_050 Hb_000751_030--Hb_011618_050 Hb_000414_050 Hb_000414_050 Hb_000751_030--Hb_000414_050 Hb_008921_010 Hb_008921_010 Hb_002054_050--Hb_008921_010 Hb_000959_230 Hb_000959_230 Hb_002054_050--Hb_000959_230 Hb_000317_510 Hb_000317_510 Hb_002054_050--Hb_000317_510 Hb_002054_050--Hb_005463_130 Hb_001005_030 Hb_001005_030 Hb_002054_050--Hb_001005_030 Hb_001486_170 Hb_001486_170 Hb_005463_130--Hb_001486_170 Hb_013726_080 Hb_013726_080 Hb_005463_130--Hb_013726_080 Hb_005463_130--Hb_000751_030 Hb_005463_130--Hb_008921_010 Hb_010315_060 Hb_010315_060 Hb_000392_230--Hb_010315_060 Hb_000649_230 Hb_000649_230 Hb_000392_230--Hb_000649_230 Hb_022132_050 Hb_022132_050 Hb_000392_230--Hb_022132_050 Hb_001195_260 Hb_001195_260 Hb_000392_230--Hb_001195_260 Hb_073973_130 Hb_073973_130 Hb_000392_230--Hb_073973_130 Hb_003119_090 Hb_003119_090 Hb_007007_040--Hb_003119_090 Hb_000019_190 Hb_000019_190 Hb_007007_040--Hb_000019_190 Hb_023313_040 Hb_023313_040 Hb_007007_040--Hb_023313_040 Hb_007007_040--Hb_003760_030 Hb_000006_010 Hb_000006_010 Hb_007007_040--Hb_000006_010 Hb_003760_030--Hb_003119_090 Hb_065755_030 Hb_065755_030 Hb_003760_030--Hb_065755_030 Hb_003760_030--Hb_000751_030 Hb_002485_030 Hb_002485_030 Hb_003760_030--Hb_002485_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.4594 7.44466 19.2921 16.2485 15.2626 12.8603
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.79685 9.70191 9.32748 6.50947 7.96594

CAGE analysis