Hb_008921_010

Information

Type -
Description -
Location Contig8921: 30815-34174
Sequence    

Annotation

kegg
ID fve:101297333
description uncharacterized protein LOC101297333
nr
ID XP_012066283.1
description PREDICTED: uncharacterized protein LOC105629323 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L3A6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23844 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61693: 30931-34113 , PASA_asmbl_61694: 31322-31534
cDNA
(Sanger)
(ID:Location)		 023_B23.ab1: 30945-33608

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008921_010 0.0 - - PREDICTED: uncharacterized protein LOC105629323 [Jatropha curcas]
2 Hb_002054_050 0.0566998519 - - PREDICTED: uncharacterized protein LOC105641285 [Jatropha curcas]
3 Hb_000959_230 0.0723036616 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A [Populus euphratica]
4 Hb_002942_210 0.0731950669 - - alpha-2,8-sialyltransferase 8b, putative [Ricinus communis]
5 Hb_000589_190 0.0753567861 - - PREDICTED: actin-related protein 5 isoform X1 [Jatropha curcas]
6 Hb_001804_110 0.0810169132 - - hypothetical protein CISIN_1g031200mg [Citrus sinensis]
7 Hb_139002_010 0.0832911946 - - alpha-(1,4)-fucosyltransferase, putative [Ricinus communis]
8 Hb_000847_080 0.0867936294 - - PREDICTED: HAUS augmin-like complex subunit 3 [Jatropha curcas]
9 Hb_000287_050 0.0899097338 - - PREDICTED: uncharacterized protein LOC105637398 [Jatropha curcas]
10 Hb_004223_110 0.0909285682 - - PREDICTED: putative HVA22-like protein g [Populus euphratica]
11 Hb_000317_510 0.0910389314 - - PREDICTED: long chain base biosynthesis protein 1 [Jatropha curcas]
12 Hb_000130_420 0.0929064421 - - PREDICTED: uncharacterized protein LOC105635728 [Jatropha curcas]
13 Hb_000608_350 0.0931171198 - - PREDICTED: ER membrane protein complex subunit 10 [Jatropha curcas]
14 Hb_001405_190 0.0933060754 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Jatropha curcas]
15 Hb_002042_030 0.0935711024 - - PREDICTED: protein YIPF1 homolog [Jatropha curcas]
16 Hb_005463_130 0.0952570153 - - PREDICTED: polygalacturonate 4-alpha-galacturonosyltransferase [Jatropha curcas]
17 Hb_000362_170 0.0963844364 - - PREDICTED: uncharacterized protein LOC105635728 [Jatropha curcas]
18 Hb_010998_040 0.0963867637 transcription factor TF Family: MYB myb3r3, putative [Ricinus communis]
19 Hb_002326_110 0.09665484 - - PREDICTED: uncharacterized protein LOC103320920 [Prunus mume]
20 Hb_000190_150 0.100678112 transcription factor TF Family: Tify PREDICTED: protein TIFY 4B-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_008921_010 Hb_008921_010 Hb_002054_050 Hb_002054_050 Hb_008921_010--Hb_002054_050 Hb_000959_230 Hb_000959_230 Hb_008921_010--Hb_000959_230 Hb_002942_210 Hb_002942_210 Hb_008921_010--Hb_002942_210 Hb_000589_190 Hb_000589_190 Hb_008921_010--Hb_000589_190 Hb_001804_110 Hb_001804_110 Hb_008921_010--Hb_001804_110 Hb_139002_010 Hb_139002_010 Hb_008921_010--Hb_139002_010 Hb_002054_050--Hb_000959_230 Hb_000317_510 Hb_000317_510 Hb_002054_050--Hb_000317_510 Hb_005463_130 Hb_005463_130 Hb_002054_050--Hb_005463_130 Hb_001005_030 Hb_001005_030 Hb_002054_050--Hb_001005_030 Hb_001501_080 Hb_001501_080 Hb_002054_050--Hb_001501_080 Hb_000959_230--Hb_001804_110 Hb_010998_040 Hb_010998_040 Hb_000959_230--Hb_010998_040 Hb_043792_010 Hb_043792_010 Hb_000959_230--Hb_043792_010 Hb_007007_040 Hb_007007_040 Hb_000959_230--Hb_007007_040 Hb_002014_040 Hb_002014_040 Hb_002942_210--Hb_002014_040 Hb_002942_210--Hb_139002_010 Hb_025668_010 Hb_025668_010 Hb_002942_210--Hb_025668_010 Hb_000847_080 Hb_000847_080 Hb_002942_210--Hb_000847_080 Hb_001931_030 Hb_001931_030 Hb_002942_210--Hb_001931_030 Hb_020141_040 Hb_020141_040 Hb_000589_190--Hb_020141_040 Hb_000589_190--Hb_000317_510 Hb_103747_020 Hb_103747_020 Hb_000589_190--Hb_103747_020 Hb_000994_020 Hb_000994_020 Hb_000589_190--Hb_000994_020 Hb_000589_190--Hb_002942_210 Hb_001804_110--Hb_010998_040 Hb_003746_030 Hb_003746_030 Hb_001804_110--Hb_003746_030 Hb_001804_110--Hb_002054_050 Hb_006688_050 Hb_006688_050 Hb_001804_110--Hb_006688_050 Hb_001140_030 Hb_001140_030 Hb_001804_110--Hb_001140_030 Hb_000139_260 Hb_000139_260 Hb_139002_010--Hb_000139_260 Hb_004912_030 Hb_004912_030 Hb_139002_010--Hb_004912_030 Hb_003436_020 Hb_003436_020 Hb_139002_010--Hb_003436_020 Hb_139002_010--Hb_002014_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.0634 15.4054 33.8208 20.4815 27.9474 13.4481
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.08481 8.83173 9.51376 11.8382 13.3652

CAGE analysis