Hb_005684_010

Information

Type -
Description -
Location Contig5684: 1484-5990
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_009765237.1
description PREDICTED: uncharacterized protein LOC104216799 [Nicotiana sylvestris]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0003676
description PREDICTED: uncharacterized protein LOC105631113

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005684_010 0.0 - - PREDICTED: uncharacterized protein LOC104216799 [Nicotiana sylvestris]
2 Hb_004109_180 0.1910272374 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 isoform X1 [Jatropha curcas]
3 Hb_001427_020 0.2540751293 - - hypothetical protein JCGZ_07310 [Jatropha curcas]
4 Hb_003020_210 0.2664683073 - - Structural maintenance of chromosomes 2-2 -like protein [Gossypium arboreum]
5 Hb_003758_020 0.2691064346 - - UGTPg34 [Panax ginseng]
6 Hb_111722_010 0.2723419014 - - PREDICTED: uncharacterized protein LOC105634044 isoform X2 [Jatropha curcas]
7 Hb_002471_300 0.2730782774 - - PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Jatropha curcas]
8 Hb_000010_140 0.2747770887 - - PREDICTED: rhodanese-like domain-containing protein 11, chloroplastic isoform X2 [Jatropha curcas]
9 Hb_001114_090 0.2751964024 - - PREDICTED: magnesium-dependent phosphatase 1 [Jatropha curcas]
10 Hb_002411_080 0.2767186623 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000086_410 0.2832264928 - - hypothetical protein CISIN_1g0263261mg [Citrus sinensis]
12 Hb_004303_040 0.2877447022 - - PREDICTED: fumarate hydratase 1, mitochondrial [Jatropha curcas]
13 Hb_006541_040 0.2915378562 - - PREDICTED: diphthamide biosynthesis protein 2 [Jatropha curcas]
14 Hb_000116_190 0.2934838696 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000441_060 0.2953383041 - - PREDICTED: glycolipid transfer protein [Jatropha curcas]
16 Hb_000539_050 0.2961455857 - - bile acid:sodium symporter, putative [Ricinus communis]
17 Hb_000046_330 0.2972061437 - - PREDICTED: uncharacterized protein LOC105631826 [Jatropha curcas]
18 Hb_006810_030 0.2974936716 - - Uncharacterized protein isoform 1 [Theobroma cacao]
19 Hb_004076_040 0.2983964339 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_004668_110 0.2994377217 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_005684_010 Hb_005684_010 Hb_004109_180 Hb_004109_180 Hb_005684_010--Hb_004109_180 Hb_001427_020 Hb_001427_020 Hb_005684_010--Hb_001427_020 Hb_003020_210 Hb_003020_210 Hb_005684_010--Hb_003020_210 Hb_003758_020 Hb_003758_020 Hb_005684_010--Hb_003758_020 Hb_111722_010 Hb_111722_010 Hb_005684_010--Hb_111722_010 Hb_002471_300 Hb_002471_300 Hb_005684_010--Hb_002471_300 Hb_084230_010 Hb_084230_010 Hb_004109_180--Hb_084230_010 Hb_001096_130 Hb_001096_130 Hb_004109_180--Hb_001096_130 Hb_007304_030 Hb_007304_030 Hb_004109_180--Hb_007304_030 Hb_002150_130 Hb_002150_130 Hb_004109_180--Hb_002150_130 Hb_002048_030 Hb_002048_030 Hb_004109_180--Hb_002048_030 Hb_106411_010 Hb_106411_010 Hb_001427_020--Hb_106411_010 Hb_076874_010 Hb_076874_010 Hb_001427_020--Hb_076874_010 Hb_011671_090 Hb_011671_090 Hb_001427_020--Hb_011671_090 Hb_004668_110 Hb_004668_110 Hb_001427_020--Hb_004668_110 Hb_003925_070 Hb_003925_070 Hb_001427_020--Hb_003925_070 Hb_000025_050 Hb_000025_050 Hb_001427_020--Hb_000025_050 Hb_010368_050 Hb_010368_050 Hb_003020_210--Hb_010368_050 Hb_000123_270 Hb_000123_270 Hb_003020_210--Hb_000123_270 Hb_083380_020 Hb_083380_020 Hb_003020_210--Hb_083380_020 Hb_000539_050 Hb_000539_050 Hb_003020_210--Hb_000539_050 Hb_000215_090 Hb_000215_090 Hb_003020_210--Hb_000215_090 Hb_005000_330 Hb_005000_330 Hb_003020_210--Hb_005000_330 Hb_003669_010 Hb_003669_010 Hb_003758_020--Hb_003669_010 Hb_003758_020--Hb_000123_270 Hb_003758_020--Hb_001427_020 Hb_003758_020--Hb_003020_210 Hb_010883_140 Hb_010883_140 Hb_003758_020--Hb_010883_140 Hb_000086_410 Hb_000086_410 Hb_003758_020--Hb_000086_410 Hb_003440_060 Hb_003440_060 Hb_111722_010--Hb_003440_060 Hb_000270_290 Hb_000270_290 Hb_111722_010--Hb_000270_290 Hb_000046_330 Hb_000046_330 Hb_111722_010--Hb_000046_330 Hb_002811_160 Hb_002811_160 Hb_111722_010--Hb_002811_160 Hb_000074_080 Hb_000074_080 Hb_111722_010--Hb_000074_080 Hb_004330_090 Hb_004330_090 Hb_111722_010--Hb_004330_090 Hb_000594_050 Hb_000594_050 Hb_002471_300--Hb_000594_050 Hb_054745_010 Hb_054745_010 Hb_002471_300--Hb_054745_010 Hb_001575_070 Hb_001575_070 Hb_002471_300--Hb_001575_070 Hb_000160_060 Hb_000160_060 Hb_002471_300--Hb_000160_060 Hb_005895_030 Hb_005895_030 Hb_002471_300--Hb_005895_030 Hb_000181_130 Hb_000181_130 Hb_002471_300--Hb_000181_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.339807 0.281426 0.238046 0.341495
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.140679 0.221026 0 0.138207 0.205262

CAGE analysis