Hb_003758_020

Information

Type -
Description -
Location Contig3758: 14063-15039
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022356mg
description hypothetical protein
nr
ID AKA44585.1
description UGTPg34 [Panax ginseng]
swissprot
ID Q53UH5
description Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase OS=Ipomoea purpurea GN=3GGT PE=2 SV=1
trembl
ID A0A0D5ZD63
description UGTPg34 OS=Panax ginseng PE=2 SV=1
Gene Ontology
ID GO:0016758
description anthocyanidin 3-o-glucoside 2 -o-glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38345: 14848-15160
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003758_020 0.0 - - UGTPg34 [Panax ginseng]
2 Hb_003669_010 0.1404336529 - - PREDICTED: psbP domain-containing protein 5, chloroplastic [Populus euphratica]
3 Hb_000123_270 0.164916307 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001427_020 0.1687699868 - - hypothetical protein JCGZ_07310 [Jatropha curcas]
5 Hb_003020_210 0.1713120754 - - Structural maintenance of chromosomes 2-2 -like protein [Gossypium arboreum]
6 Hb_010883_140 0.1825900362 - - PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Jatropha curcas]
7 Hb_000086_410 0.1888073015 - - hypothetical protein CISIN_1g0263261mg [Citrus sinensis]
8 Hb_114336_030 0.1919520398 - - PREDICTED: uncharacterized protein LOC105642104 [Jatropha curcas]
9 Hb_001005_160 0.1931888073 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000544_030 0.1980509747 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000539_050 0.2039595682 - - bile acid:sodium symporter, putative [Ricinus communis]
12 Hb_000004_010 0.2076948247 - - hypothetical protein Csa_6G120400 [Cucumis sativus]
13 Hb_010488_040 0.2082778337 - - PREDICTED: phosphomannomutase [Populus euphratica]
14 Hb_002960_150 0.2103075586 - - hypothetical protein CISIN_1g029215mg [Citrus sinensis]
15 Hb_001097_100 0.2105420606 - - Chaperone DnaJ-domain superfamily protein [Theobroma cacao]
16 Hb_124373_010 0.2116299647 - - PREDICTED: BRCA1-A complex subunit BRE isoform X1 [Jatropha curcas]
17 Hb_074449_010 0.2125043328 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
18 Hb_000215_090 0.2139070718 - - cytochrome b5 domain-containing family protein [Populus trichocarpa]
19 Hb_004093_020 0.2144554879 - - Calcium-binding EF-hand family protein [Theobroma cacao]
20 Hb_000684_260 0.2155061978 - - PREDICTED: probable DNA helicase MCM8 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_003758_020 Hb_003758_020 Hb_003669_010 Hb_003669_010 Hb_003758_020--Hb_003669_010 Hb_000123_270 Hb_000123_270 Hb_003758_020--Hb_000123_270 Hb_001427_020 Hb_001427_020 Hb_003758_020--Hb_001427_020 Hb_003020_210 Hb_003020_210 Hb_003758_020--Hb_003020_210 Hb_010883_140 Hb_010883_140 Hb_003758_020--Hb_010883_140 Hb_000086_410 Hb_000086_410 Hb_003758_020--Hb_000086_410 Hb_045770_010 Hb_045770_010 Hb_003669_010--Hb_045770_010 Hb_000004_010 Hb_000004_010 Hb_003669_010--Hb_000004_010 Hb_008566_040 Hb_008566_040 Hb_003669_010--Hb_008566_040 Hb_002960_150 Hb_002960_150 Hb_003669_010--Hb_002960_150 Hb_003669_010--Hb_003020_210 Hb_000123_270--Hb_003020_210 Hb_005000_330 Hb_005000_330 Hb_000123_270--Hb_005000_330 Hb_000948_200 Hb_000948_200 Hb_000123_270--Hb_000948_200 Hb_004093_020 Hb_004093_020 Hb_000123_270--Hb_004093_020 Hb_083380_020 Hb_083380_020 Hb_000123_270--Hb_083380_020 Hb_106411_010 Hb_106411_010 Hb_001427_020--Hb_106411_010 Hb_076874_010 Hb_076874_010 Hb_001427_020--Hb_076874_010 Hb_011671_090 Hb_011671_090 Hb_001427_020--Hb_011671_090 Hb_004668_110 Hb_004668_110 Hb_001427_020--Hb_004668_110 Hb_003925_070 Hb_003925_070 Hb_001427_020--Hb_003925_070 Hb_000025_050 Hb_000025_050 Hb_001427_020--Hb_000025_050 Hb_010368_050 Hb_010368_050 Hb_003020_210--Hb_010368_050 Hb_003020_210--Hb_083380_020 Hb_000539_050 Hb_000539_050 Hb_003020_210--Hb_000539_050 Hb_000215_090 Hb_000215_090 Hb_003020_210--Hb_000215_090 Hb_003020_210--Hb_005000_330 Hb_074449_010 Hb_074449_010 Hb_010883_140--Hb_074449_010 Hb_002541_020 Hb_002541_020 Hb_010883_140--Hb_002541_020 Hb_010883_140--Hb_003669_010 Hb_002818_050 Hb_002818_050 Hb_010883_140--Hb_002818_050 Hb_010655_020 Hb_010655_020 Hb_010883_140--Hb_010655_020 Hb_000074_100 Hb_000074_100 Hb_010883_140--Hb_000074_100 Hb_005170_010 Hb_005170_010 Hb_000086_410--Hb_005170_010 Hb_000086_410--Hb_000004_010 Hb_000086_410--Hb_003669_010 Hb_007477_050 Hb_007477_050 Hb_000086_410--Hb_007477_050 Hb_002079_050 Hb_002079_050 Hb_000086_410--Hb_002079_050 Hb_000703_100 Hb_000703_100 Hb_000086_410--Hb_000703_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.143206 0.0371627 0.404559 0.554934 0.173419 0.274481
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.305197 0.239856 0 0.0655957 0.154601

CAGE analysis