Hb_005170_010

Information

Type -
Description -
Location Contig5170: 1055-1891
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005170_010 0.0 - - -
2 Hb_000230_180 0.0901884102 - - prolyl 4-hydroxylase alpha subunit, putative [Ricinus communis]
3 Hb_000077_290 0.0953984562 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000035_330 0.1027597172 - - Transmembrane protein 85 [Theobroma cacao]
5 Hb_086639_080 0.1095874087 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002611_020 0.1126585717 - - PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like [Populus euphratica]
7 Hb_002226_080 0.1224420683 - - PREDICTED: uncharacterized protein LOC105641402 isoform X1 [Jatropha curcas]
8 Hb_010003_010 0.1303305278 - - PREDICTED: uncharacterized protein LOC105630174 isoform X2 [Jatropha curcas]
9 Hb_000890_230 0.1309412996 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
10 Hb_134429_010 0.1320983711 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002486_050 0.1333490674 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
12 Hb_005062_110 0.1356995615 - - PREDICTED: transmembrane 9 superfamily member 1 [Jatropha curcas]
13 Hb_012194_060 0.1362055196 - - PREDICTED: uncharacterized protein LOC105636108 [Jatropha curcas]
14 Hb_000056_130 0.1366778569 - - Sucrose Transporter 2C [Hevea brasiliensis subsp. brasiliensis]
15 Hb_000107_080 0.1387034617 - - PREDICTED: uncharacterized protein LOC105641009 [Jatropha curcas]
16 Hb_075764_010 0.1393910189 - - PREDICTED: PRA1 family protein A1-like [Jatropha curcas]
17 Hb_001191_110 0.1394587555 - - sur2 hydroxylase/desaturase, putative [Ricinus communis]
18 Hb_031931_020 0.1402959079 - - Minor histocompatibility antigen H13, putative [Ricinus communis]
19 Hb_000622_110 0.1408269379 - - cmp-sialic acid transporter, putative [Ricinus communis]
20 Hb_050912_010 0.1408884319 - - PREDICTED: amidase 1-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_005170_010 Hb_005170_010 Hb_000230_180 Hb_000230_180 Hb_005170_010--Hb_000230_180 Hb_000077_290 Hb_000077_290 Hb_005170_010--Hb_000077_290 Hb_000035_330 Hb_000035_330 Hb_005170_010--Hb_000035_330 Hb_086639_080 Hb_086639_080 Hb_005170_010--Hb_086639_080 Hb_002611_020 Hb_002611_020 Hb_005170_010--Hb_002611_020 Hb_002226_080 Hb_002226_080 Hb_005170_010--Hb_002226_080 Hb_000230_180--Hb_002611_020 Hb_075764_010 Hb_075764_010 Hb_000230_180--Hb_075764_010 Hb_000230_180--Hb_086639_080 Hb_002498_050 Hb_002498_050 Hb_000230_180--Hb_002498_050 Hb_000696_010 Hb_000696_010 Hb_000230_180--Hb_000696_010 Hb_000077_290--Hb_000230_180 Hb_004525_040 Hb_004525_040 Hb_000077_290--Hb_004525_040 Hb_012194_060 Hb_012194_060 Hb_000077_290--Hb_012194_060 Hb_000077_290--Hb_000035_330 Hb_000889_100 Hb_000889_100 Hb_000077_290--Hb_000889_100 Hb_000701_030 Hb_000701_030 Hb_000035_330--Hb_000701_030 Hb_003097_140 Hb_003097_140 Hb_000035_330--Hb_003097_140 Hb_002902_130 Hb_002902_130 Hb_000035_330--Hb_002902_130 Hb_143629_130 Hb_143629_130 Hb_000035_330--Hb_143629_130 Hb_007286_020 Hb_007286_020 Hb_000035_330--Hb_007286_020 Hb_001006_270 Hb_001006_270 Hb_000035_330--Hb_001006_270 Hb_000139_530 Hb_000139_530 Hb_086639_080--Hb_000139_530 Hb_086639_080--Hb_007286_020 Hb_000622_110 Hb_000622_110 Hb_086639_080--Hb_000622_110 Hb_000002_480 Hb_000002_480 Hb_086639_080--Hb_000002_480 Hb_000331_370 Hb_000331_370 Hb_086639_080--Hb_000331_370 Hb_004102_170 Hb_004102_170 Hb_086639_080--Hb_004102_170 Hb_181328_010 Hb_181328_010 Hb_002611_020--Hb_181328_010 Hb_002400_330 Hb_002400_330 Hb_002611_020--Hb_002400_330 Hb_002122_010 Hb_002122_010 Hb_002611_020--Hb_002122_010 Hb_002611_020--Hb_000696_010 Hb_000056_130 Hb_000056_130 Hb_002226_080--Hb_000056_130 Hb_000004_020 Hb_000004_020 Hb_002226_080--Hb_000004_020 Hb_009569_040 Hb_009569_040 Hb_002226_080--Hb_009569_040 Hb_000058_110 Hb_000058_110 Hb_002226_080--Hb_000058_110 Hb_002928_090 Hb_002928_090 Hb_002226_080--Hb_002928_090 Hb_001946_180 Hb_001946_180 Hb_002226_080--Hb_001946_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.357065 0.737423 1.15161 3.32671 0.98586 1.94439
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.842036 0.529109 0.434572 1.06081 1.19576

CAGE analysis