Hb_002498_050

Information

Type -
Description -
Location Contig2498: 30147-35970
Sequence    

Annotation

kegg
ID rcu:RCOM_0903730
description Aspartic proteinase precursor, putative (EC:3.4.23.40)
nr
ID XP_012091315.1
description PREDICTED: aspartic proteinase-like [Jatropha curcas]
swissprot
ID O04057
description Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1
trembl
ID A0A067JDB7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21189 PE=3 SV=1
Gene Ontology
ID GO:0005783
description aspartic proteinase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25980: 30099-35954
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002498_050 0.0 - - PREDICTED: aspartic proteinase-like [Jatropha curcas]
2 Hb_000230_180 0.1052804533 - - prolyl 4-hydroxylase alpha subunit, putative [Ricinus communis]
3 Hb_028707_080 0.1193178541 - - plasma membrane aquaporin 1 [Hevea brasiliensis]
4 Hb_002192_030 0.1371615855 - - conserved hypothetical protein [Ricinus communis]
5 Hb_009851_050 0.1403356173 - - PREDICTED: nephrocystin-3 [Jatropha curcas]
6 Hb_000091_060 0.1404097449 - - PREDICTED: galactose oxidase [Jatropha curcas]
7 Hb_000890_230 0.1427824438 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
8 Hb_004466_040 0.1476958999 - - PREDICTED: protein RER1B-like [Gossypium raimondii]
9 Hb_001266_070 0.1485592644 - - PREDICTED: mannan endo-1,4-beta-mannosidase 7 [Jatropha curcas]
10 Hb_131035_010 0.1487381111 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_000103_310 0.1532676659 - - PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Jatropha curcas]
12 Hb_000077_290 0.1554101558 - - conserved hypothetical protein [Ricinus communis]
13 Hb_086639_080 0.1555092795 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000331_370 0.1555428342 - - Glyceraldehyde-3-phosphate dehydrogenase-2C cytosolic [Gossypium arboreum]
15 Hb_001474_040 0.1563566665 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
16 Hb_008054_050 0.1571234582 - - PREDICTED: uncharacterized protein LOC101212042 [Cucumis sativus]
17 Hb_000107_080 0.1571897033 - - PREDICTED: uncharacterized protein LOC105641009 [Jatropha curcas]
18 Hb_031931_020 0.1574968128 - - Minor histocompatibility antigen H13, putative [Ricinus communis]
19 Hb_002611_020 0.1592548488 - - PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like [Populus euphratica]
20 Hb_009247_010 0.1593111726 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002498_050 Hb_002498_050 Hb_000230_180 Hb_000230_180 Hb_002498_050--Hb_000230_180 Hb_028707_080 Hb_028707_080 Hb_002498_050--Hb_028707_080 Hb_002192_030 Hb_002192_030 Hb_002498_050--Hb_002192_030 Hb_009851_050 Hb_009851_050 Hb_002498_050--Hb_009851_050 Hb_000091_060 Hb_000091_060 Hb_002498_050--Hb_000091_060 Hb_000890_230 Hb_000890_230 Hb_002498_050--Hb_000890_230 Hb_002611_020 Hb_002611_020 Hb_000230_180--Hb_002611_020 Hb_005170_010 Hb_005170_010 Hb_000230_180--Hb_005170_010 Hb_075764_010 Hb_075764_010 Hb_000230_180--Hb_075764_010 Hb_086639_080 Hb_086639_080 Hb_000230_180--Hb_086639_080 Hb_000696_010 Hb_000696_010 Hb_000230_180--Hb_000696_010 Hb_028707_080--Hb_009851_050 Hb_004306_040 Hb_004306_040 Hb_028707_080--Hb_004306_040 Hb_028707_080--Hb_000230_180 Hb_001546_070 Hb_001546_070 Hb_028707_080--Hb_001546_070 Hb_000664_110 Hb_000664_110 Hb_028707_080--Hb_000664_110 Hb_007286_020 Hb_007286_020 Hb_002192_030--Hb_007286_020 Hb_131035_010 Hb_131035_010 Hb_002192_030--Hb_131035_010 Hb_002192_030--Hb_000890_230 Hb_002192_030--Hb_086639_080 Hb_027760_070 Hb_027760_070 Hb_002192_030--Hb_027760_070 Hb_000193_300 Hb_000193_300 Hb_002192_030--Hb_000193_300 Hb_000008_270 Hb_000008_270 Hb_009851_050--Hb_000008_270 Hb_002631_070 Hb_002631_070 Hb_009851_050--Hb_002631_070 Hb_017295_010 Hb_017295_010 Hb_009851_050--Hb_017295_010 Hb_003994_280 Hb_003994_280 Hb_009851_050--Hb_003994_280 Hb_009529_030 Hb_009529_030 Hb_009851_050--Hb_009529_030 Hb_005843_160 Hb_005843_160 Hb_000091_060--Hb_005843_160 Hb_009485_020 Hb_009485_020 Hb_000091_060--Hb_009485_020 Hb_074197_020 Hb_074197_020 Hb_000091_060--Hb_074197_020 Hb_000258_290 Hb_000258_290 Hb_000091_060--Hb_000258_290 Hb_029866_100 Hb_029866_100 Hb_000091_060--Hb_029866_100 Hb_008406_180 Hb_008406_180 Hb_000890_230--Hb_008406_180 Hb_000890_230--Hb_086639_080 Hb_000107_080 Hb_000107_080 Hb_000890_230--Hb_000107_080 Hb_000331_370 Hb_000331_370 Hb_000890_230--Hb_000331_370 Hb_000002_480 Hb_000002_480 Hb_000890_230--Hb_000002_480 Hb_012651_010 Hb_012651_010 Hb_000890_230--Hb_012651_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
33.3125 27.8976 29.1197 125.525 57.5845 57.0036
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.7571 8.34903 20.4825 26.2257 21.8422

CAGE analysis