Hb_074197_020

Information

Type -
Description -
Location Contig74197: 18098-22624
Sequence    

Annotation

kegg
ID pop:POPTR_0001s08040g
description hypothetical protein
nr
ID XP_012087087.1
description PREDICTED: uncharacterized protein LOC105645948 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1C1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20745 PE=4 SV=1
Gene Ontology
ID GO:0003676
description isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56468: 17902-22617 , PASA_asmbl_56469: 17902-22612
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074197_020 0.0 - - PREDICTED: uncharacterized protein LOC105645948 [Jatropha curcas]
2 Hb_002814_060 0.1118411908 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
3 Hb_000424_150 0.1151768818 - - PREDICTED: copper transporter 5.1-like [Jatropha curcas]
4 Hb_004223_290 0.1184514839 - - PREDICTED: protein IQ-DOMAIN 32 [Jatropha curcas]
5 Hb_003376_260 0.1190117996 - - PREDICTED: uncharacterized protein LOC105642207 isoform X1 [Jatropha curcas]
6 Hb_000091_060 0.1219352662 - - PREDICTED: galactose oxidase [Jatropha curcas]
7 Hb_000630_030 0.1243872805 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2 isoform X1 [Populus euphratica]
8 Hb_002301_310 0.1270662423 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF1.4 isoform X1 [Jatropha curcas]
9 Hb_006508_030 0.1306345853 - - PREDICTED: CDPK-related kinase 1-like [Jatropha curcas]
10 Hb_000482_150 0.1325185427 - - PREDICTED: zinc transporter 4, chloroplastic [Jatropha curcas]
11 Hb_029866_100 0.1341853241 - - PREDICTED: probable beta-1,3-galactosyltransferase 11 [Jatropha curcas]
12 Hb_002784_030 0.1349502214 - - hypothetical protein POPTR_0001s06740g [Populus trichocarpa]
13 Hb_000008_270 0.1384015248 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein REVOLUTA [Jatropha curcas]
14 Hb_000640_070 0.1387070824 - - PREDICTED: vacuolar protein sorting-associated protein 51 homolog [Jatropha curcas]
15 Hb_004701_050 0.1388664247 - - alpha1 family protein [Populus trichocarpa]
16 Hb_000261_100 0.1391038773 - - PREDICTED: beta-galactosidase 9 isoform X2 [Jatropha curcas]
17 Hb_004374_080 0.1429522534 - - PREDICTED: uncharacterized protein LOC105645766 [Jatropha curcas]
18 Hb_000345_360 0.1429642738 - - PREDICTED: protein AUXIN RESPONSE 4 [Jatropha curcas]
19 Hb_000258_290 0.1429805617 transcription factor TF Family: TCP PREDICTED: transcription factor TCP15 [Jatropha curcas]
20 Hb_012215_010 0.1431045158 - - PREDICTED: YTH domain-containing family protein 1 [Populus euphratica]

Gene co-expression network

sample Hb_074197_020 Hb_074197_020 Hb_002814_060 Hb_002814_060 Hb_074197_020--Hb_002814_060 Hb_000424_150 Hb_000424_150 Hb_074197_020--Hb_000424_150 Hb_004223_290 Hb_004223_290 Hb_074197_020--Hb_004223_290 Hb_003376_260 Hb_003376_260 Hb_074197_020--Hb_003376_260 Hb_000091_060 Hb_000091_060 Hb_074197_020--Hb_000091_060 Hb_000630_030 Hb_000630_030 Hb_074197_020--Hb_000630_030 Hb_007456_040 Hb_007456_040 Hb_002814_060--Hb_007456_040 Hb_086287_010 Hb_086287_010 Hb_002814_060--Hb_086287_010 Hb_006508_030 Hb_006508_030 Hb_002814_060--Hb_006508_030 Hb_001194_020 Hb_001194_020 Hb_002814_060--Hb_001194_020 Hb_002784_030 Hb_002784_030 Hb_002814_060--Hb_002784_030 Hb_000424_150--Hb_002814_060 Hb_002301_310 Hb_002301_310 Hb_000424_150--Hb_002301_310 Hb_000482_150 Hb_000482_150 Hb_000424_150--Hb_000482_150 Hb_000424_150--Hb_003376_260 Hb_003471_020 Hb_003471_020 Hb_000424_150--Hb_003471_020 Hb_004875_030 Hb_004875_030 Hb_004223_290--Hb_004875_030 Hb_000345_360 Hb_000345_360 Hb_004223_290--Hb_000345_360 Hb_000035_410 Hb_000035_410 Hb_004223_290--Hb_000035_410 Hb_002044_050 Hb_002044_050 Hb_004223_290--Hb_002044_050 Hb_000785_040 Hb_000785_040 Hb_004223_290--Hb_000785_040 Hb_041828_010 Hb_041828_010 Hb_004223_290--Hb_041828_010 Hb_024698_010 Hb_024698_010 Hb_003376_260--Hb_024698_010 Hb_116420_040 Hb_116420_040 Hb_003376_260--Hb_116420_040 Hb_003376_260--Hb_002301_310 Hb_005048_140 Hb_005048_140 Hb_003376_260--Hb_005048_140 Hb_004657_090 Hb_004657_090 Hb_003376_260--Hb_004657_090 Hb_005843_160 Hb_005843_160 Hb_000091_060--Hb_005843_160 Hb_009485_020 Hb_009485_020 Hb_000091_060--Hb_009485_020 Hb_000258_290 Hb_000258_290 Hb_000091_060--Hb_000258_290 Hb_002498_050 Hb_002498_050 Hb_000091_060--Hb_002498_050 Hb_029866_100 Hb_029866_100 Hb_000091_060--Hb_029866_100 Hb_000580_030 Hb_000580_030 Hb_000630_030--Hb_000580_030 Hb_015026_100 Hb_015026_100 Hb_000630_030--Hb_015026_100 Hb_000640_070 Hb_000640_070 Hb_000630_030--Hb_000640_070 Hb_000413_070 Hb_000413_070 Hb_000630_030--Hb_000413_070 Hb_004355_040 Hb_004355_040 Hb_000630_030--Hb_004355_040 Hb_002092_070 Hb_002092_070 Hb_000630_030--Hb_002092_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.4106 8.0234 7.38816 19.0641 12.241 16.469
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.05776 1.70804 2.97165 8.65159 12.0983

CAGE analysis