Hb_086287_010

Information

Type -
Description -
Location Contig86287: 17895-21053
Sequence    

Annotation

kegg
ID rcu:RCOM_1565970
description Aminoacylase-1, putative (EC:3.5.1.14)
nr
ID XP_012074822.1
description PREDICTED: aminoacylase-1 isoform X1 [Jatropha curcas]
swissprot
ID Q99JW2
description Aminoacylase-1 OS=Mus musculus GN=Acy1 PE=1 SV=1
trembl
ID A0A067LHZ3
description Aminoacylase-1 OS=Jatropha curcas GN=JCGZ_10750 PE=3 SV=1
Gene Ontology
ID GO:0005737
description aminoacylase-1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60855: 17910-21077
cDNA
(Sanger)
(ID:Location)		 034_H20.ab1: 20145-21077

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_086287_010 0.0 - - PREDICTED: aminoacylase-1 isoform X1 [Jatropha curcas]
2 Hb_004109_370 0.0736826112 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
3 Hb_061878_010 0.0780448605 - - hypothetical protein CISIN_1g0094072mg, partial [Citrus sinensis]
4 Hb_000261_030 0.0788282483 - - PREDICTED: uncharacterized protein LOC105633147 [Jatropha curcas]
5 Hb_160459_040 0.0802120824 - - hypothetical protein JCGZ_01511 [Jatropha curcas]
6 Hb_000035_410 0.0811423526 - - PREDICTED: eukaryotic translation initiation factor 3 subunit B-like [Jatropha curcas]
7 Hb_028872_070 0.0824120191 desease resistance Gene Name: DEAD PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1 [Jatropha curcas]
8 Hb_001454_370 0.0833631129 - - PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Jatropha curcas]
9 Hb_000990_090 0.0861108239 - - PREDICTED: ER membrane protein complex subunit 1 [Jatropha curcas]
10 Hb_006618_090 0.0864418881 - - PREDICTED: FAM10 family protein At4g22670 [Jatropha curcas]
11 Hb_009296_010 0.0894677027 - - PREDICTED: eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X3 [Jatropha curcas]
12 Hb_009771_110 0.0922590287 - - PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2 [Jatropha curcas]
13 Hb_002784_030 0.0926503178 - - hypothetical protein POPTR_0001s06740g [Populus trichocarpa]
14 Hb_002078_100 0.092919196 - - PREDICTED: mannosyl-oligosaccharide glucosidase GCS1-like [Jatropha curcas]
15 Hb_005053_010 0.0934612534 - - PREDICTED: protease Do-like 9 [Jatropha curcas]
16 Hb_000184_150 0.0937947134 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]
17 Hb_140049_080 0.0941876325 - - PREDICTED: probable RNA helicase SDE3 [Jatropha curcas]
18 Hb_000027_050 0.0946673443 - - PREDICTED: uncharacterized protein LOC105636933 isoform X1 [Jatropha curcas]
19 Hb_001085_110 0.0947657869 - - T6D22.2 [Arabidopsis thaliana]
20 Hb_001504_040 0.0948144973 - - PREDICTED: factor of DNA methylation 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_086287_010 Hb_086287_010 Hb_004109_370 Hb_004109_370 Hb_086287_010--Hb_004109_370 Hb_061878_010 Hb_061878_010 Hb_086287_010--Hb_061878_010 Hb_000261_030 Hb_000261_030 Hb_086287_010--Hb_000261_030 Hb_160459_040 Hb_160459_040 Hb_086287_010--Hb_160459_040 Hb_000035_410 Hb_000035_410 Hb_086287_010--Hb_000035_410 Hb_028872_070 Hb_028872_070 Hb_086287_010--Hb_028872_070 Hb_001085_110 Hb_001085_110 Hb_004109_370--Hb_001085_110 Hb_140049_080 Hb_140049_080 Hb_004109_370--Hb_140049_080 Hb_009252_050 Hb_009252_050 Hb_004109_370--Hb_009252_050 Hb_004109_370--Hb_061878_010 Hb_001552_030 Hb_001552_030 Hb_004109_370--Hb_001552_030 Hb_000139_130 Hb_000139_130 Hb_004109_370--Hb_000139_130 Hb_061878_010--Hb_140049_080 Hb_006355_090 Hb_006355_090 Hb_061878_010--Hb_006355_090 Hb_061878_010--Hb_000139_130 Hb_012092_060 Hb_012092_060 Hb_061878_010--Hb_012092_060 Hb_000037_220 Hb_000037_220 Hb_061878_010--Hb_000037_220 Hb_000740_100 Hb_000740_100 Hb_000261_030--Hb_000740_100 Hb_000261_030--Hb_000035_410 Hb_001235_230 Hb_001235_230 Hb_000261_030--Hb_001235_230 Hb_003124_160 Hb_003124_160 Hb_000261_030--Hb_003124_160 Hb_004453_110 Hb_004453_110 Hb_000261_030--Hb_004453_110 Hb_002329_040 Hb_002329_040 Hb_000261_030--Hb_002329_040 Hb_005053_010 Hb_005053_010 Hb_160459_040--Hb_005053_010 Hb_009771_110 Hb_009771_110 Hb_160459_040--Hb_009771_110 Hb_012053_080 Hb_012053_080 Hb_160459_040--Hb_012053_080 Hb_160459_040--Hb_000261_030 Hb_002631_140 Hb_002631_140 Hb_160459_040--Hb_002631_140 Hb_160459_040--Hb_028872_070 Hb_032920_130 Hb_032920_130 Hb_000035_410--Hb_032920_130 Hb_000035_410--Hb_001235_230 Hb_027380_140 Hb_027380_140 Hb_000035_410--Hb_027380_140 Hb_000785_040 Hb_000785_040 Hb_000035_410--Hb_000785_040 Hb_002044_170 Hb_002044_170 Hb_000035_410--Hb_002044_170 Hb_000603_030 Hb_000603_030 Hb_028872_070--Hb_000603_030 Hb_000398_080 Hb_000398_080 Hb_028872_070--Hb_000398_080 Hb_004096_190 Hb_004096_190 Hb_028872_070--Hb_004096_190 Hb_028872_070--Hb_009771_110 Hb_133702_030 Hb_133702_030 Hb_028872_070--Hb_133702_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.3244 33.5476 29.4887 34.1925 33.7434 49.5834
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.1812 8.01968 13.9264 39.6454 26.2741

CAGE analysis