Hb_004355_040

Information

Type -
Description -
Location Contig4355: 67267-69119
Sequence    

Annotation

kegg
ID rcu:RCOM_0681990
description epoxide hydrolase, putative (EC:2.7.10.2)
nr
ID XP_002516953.1
description epoxide hydrolase, putative [Ricinus communis]
swissprot
ID P34913
description Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2
trembl
ID B9RT84
description Epoxide hydrolase, putative OS=Ricinus communis GN=RCOM_0681990 PE=4 SV=1
Gene Ontology
ID GO:0004715
description bifunctional epoxide hydrolase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42439: 67257-69018
cDNA
(Sanger)
(ID:Location)		 030_B24.ab1: 68614-69009 , 036_J02.ab1: 67621-68989

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004355_040 0.0 - - epoxide hydrolase, putative [Ricinus communis]
2 Hb_000630_030 0.0977920717 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2 isoform X1 [Populus euphratica]
3 Hb_000580_030 0.1064288822 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
4 Hb_000318_040 0.1134749352 - - hypothetical protein JCGZ_04877 [Jatropha curcas]
5 Hb_000413_070 0.1142307087 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001103_090 0.1187287063 - - PREDICTED: patellin-3 [Populus euphratica]
7 Hb_001558_040 0.1201691737 - - PREDICTED: GPI ethanolamine phosphate transferase 2 [Jatropha curcas]
8 Hb_000205_280 0.1226386985 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
9 Hb_000320_290 0.1349683404 - - PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]
10 Hb_001623_110 0.1354258772 - - PREDICTED: xylosyltransferase 1 [Jatropha curcas]
11 Hb_000098_050 0.1358716303 - - BnaCnng11900D [Brassica napus]
12 Hb_000020_160 0.1359936252 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Gossypium raimondii]
13 Hb_000580_050 0.1374503121 - - -
14 Hb_001059_130 0.1377308977 - - PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X1 [Jatropha curcas]
15 Hb_001662_050 0.1378491587 desease resistance Gene Name: NB-ARC Disease resistance protein RPM1, putative [Ricinus communis]
16 Hb_015026_100 0.138535704 - - PREDICTED: transmembrane protein 184C-like [Jatropha curcas]
17 Hb_001307_240 0.1394788446 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase SUVR2 isoform X2 [Jatropha curcas]
18 Hb_000302_170 0.1395354148 - - PREDICTED: dnaJ protein ERDJ2A-like [Jatropha curcas]
19 Hb_001159_030 0.1407903786 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
20 Hb_002092_070 0.1413188884 - - PREDICTED: aluminum-activated malate transporter 9-like [Jatropha curcas]

Gene co-expression network

sample Hb_004355_040 Hb_004355_040 Hb_000630_030 Hb_000630_030 Hb_004355_040--Hb_000630_030 Hb_000580_030 Hb_000580_030 Hb_004355_040--Hb_000580_030 Hb_000318_040 Hb_000318_040 Hb_004355_040--Hb_000318_040 Hb_000413_070 Hb_000413_070 Hb_004355_040--Hb_000413_070 Hb_001103_090 Hb_001103_090 Hb_004355_040--Hb_001103_090 Hb_001558_040 Hb_001558_040 Hb_004355_040--Hb_001558_040 Hb_000630_030--Hb_000580_030 Hb_015026_100 Hb_015026_100 Hb_000630_030--Hb_015026_100 Hb_000640_070 Hb_000640_070 Hb_000630_030--Hb_000640_070 Hb_000630_030--Hb_000413_070 Hb_002092_070 Hb_002092_070 Hb_000630_030--Hb_002092_070 Hb_001489_100 Hb_001489_100 Hb_000580_030--Hb_001489_100 Hb_000890_030 Hb_000890_030 Hb_000580_030--Hb_000890_030 Hb_007800_020 Hb_007800_020 Hb_000580_030--Hb_007800_020 Hb_027654_020 Hb_027654_020 Hb_000580_030--Hb_027654_020 Hb_005322_050 Hb_005322_050 Hb_000580_030--Hb_005322_050 Hb_001623_110 Hb_001623_110 Hb_000580_030--Hb_001623_110 Hb_000318_040--Hb_001558_040 Hb_001009_150 Hb_001009_150 Hb_000318_040--Hb_001009_150 Hb_002995_040 Hb_002995_040 Hb_000318_040--Hb_002995_040 Hb_000318_040--Hb_001103_090 Hb_007137_050 Hb_007137_050 Hb_000318_040--Hb_007137_050 Hb_001349_030 Hb_001349_030 Hb_000413_070--Hb_001349_030 Hb_000588_080 Hb_000588_080 Hb_000413_070--Hb_000588_080 Hb_001059_130 Hb_001059_130 Hb_000413_070--Hb_001059_130 Hb_000413_070--Hb_000580_030 Hb_001675_320 Hb_001675_320 Hb_001103_090--Hb_001675_320 Hb_001226_110 Hb_001226_110 Hb_001103_090--Hb_001226_110 Hb_000205_280 Hb_000205_280 Hb_001103_090--Hb_000205_280 Hb_000020_160 Hb_000020_160 Hb_001103_090--Hb_000020_160 Hb_001259_120 Hb_001259_120 Hb_001103_090--Hb_001259_120 Hb_000260_780 Hb_000260_780 Hb_001103_090--Hb_000260_780 Hb_001307_240 Hb_001307_240 Hb_001558_040--Hb_001307_240 Hb_002007_260 Hb_002007_260 Hb_001558_040--Hb_002007_260 Hb_000579_130 Hb_000579_130 Hb_001558_040--Hb_000579_130 Hb_001085_080 Hb_001085_080 Hb_001558_040--Hb_001085_080 Hb_001558_040--Hb_000020_160 Hb_158845_060 Hb_158845_060 Hb_001558_040--Hb_158845_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
55.5396 56.6037 51.5032 96.668 43.4573 25.8638
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.1264 8.55556 9.72688 58.044 37.494

CAGE analysis