Hb_131035_010

Information

Type -
Description -
Location Contig131035: 989-2600
Sequence    

Annotation

kegg
ID rcu:RCOM_1494410
description serine-threonine protein kinase, plant-type, putative (EC:2.7.10.2)
nr
ID XP_002516047.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q9C821
description Proline-rich receptor-like protein kinase PERK15 OS=Arabidopsis thaliana GN=PERK15 PE=2 SV=1
trembl
ID B9RQM8
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1494410 PE=3 SV=1
Gene Ontology
ID GO:0000166
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_131035_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_000035_200 0.1098427943 - - PREDICTED: phospholipase D Z-like [Jatropha curcas]
3 Hb_002192_030 0.1102982009 - - conserved hypothetical protein [Ricinus communis]
4 Hb_007286_020 0.1135514254 - - hypothetical protein L484_010675 [Morus notabilis]
5 Hb_001500_110 0.1210554673 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_027760_070 0.121735314 - - PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Jatropha curcas]
7 Hb_146081_010 0.1264656837 - - PREDICTED: protein SCAI [Jatropha curcas]
8 Hb_012506_010 0.1293057444 - - PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2 [Jatropha curcas]
9 Hb_000359_140 0.1323453679 - - PREDICTED: transmembrane protein 56-like [Jatropha curcas]
10 Hb_004531_120 0.1333356768 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
11 Hb_000836_550 0.1333656585 - - PREDICTED: reticulon-like protein B5 [Jatropha curcas]
12 Hb_000146_040 0.1362439056 - - PREDICTED: reticulon-like protein B11 [Jatropha curcas]
13 Hb_000116_150 0.1389281217 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
14 Hb_000931_020 0.1396481732 - - PREDICTED: uncharacterized protein LOC105649774 isoform X1 [Jatropha curcas]
15 Hb_004040_030 0.1401259008 - - PREDICTED: probable inactive purple acid phosphatase 28 isoform X2 [Jatropha curcas]
16 Hb_135757_010 0.1406468342 - - PREDICTED: subtilisin-like protease SBT1.6 [Jatropha curcas]
17 Hb_009247_010 0.1407229497 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
18 Hb_000140_350 0.1410347637 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001051_070 0.1420422004 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
20 Hb_001258_110 0.1421357837 - - transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_131035_010 Hb_131035_010 Hb_000035_200 Hb_000035_200 Hb_131035_010--Hb_000035_200 Hb_002192_030 Hb_002192_030 Hb_131035_010--Hb_002192_030 Hb_007286_020 Hb_007286_020 Hb_131035_010--Hb_007286_020 Hb_001500_110 Hb_001500_110 Hb_131035_010--Hb_001500_110 Hb_027760_070 Hb_027760_070 Hb_131035_010--Hb_027760_070 Hb_146081_010 Hb_146081_010 Hb_131035_010--Hb_146081_010 Hb_000146_040 Hb_000146_040 Hb_000035_200--Hb_000146_040 Hb_000696_010 Hb_000696_010 Hb_000035_200--Hb_000696_010 Hb_000035_200--Hb_001500_110 Hb_000270_520 Hb_000270_520 Hb_000035_200--Hb_000270_520 Hb_004970_140 Hb_004970_140 Hb_000035_200--Hb_004970_140 Hb_002192_030--Hb_007286_020 Hb_000890_230 Hb_000890_230 Hb_002192_030--Hb_000890_230 Hb_086639_080 Hb_086639_080 Hb_002192_030--Hb_086639_080 Hb_002192_030--Hb_027760_070 Hb_000193_300 Hb_000193_300 Hb_002192_030--Hb_000193_300 Hb_001051_070 Hb_001051_070 Hb_007286_020--Hb_001051_070 Hb_004102_170 Hb_004102_170 Hb_007286_020--Hb_004102_170 Hb_007286_020--Hb_086639_080 Hb_010042_030 Hb_010042_030 Hb_007286_020--Hb_010042_030 Hb_000679_100 Hb_000679_100 Hb_007286_020--Hb_000679_100 Hb_002486_050 Hb_002486_050 Hb_007286_020--Hb_002486_050 Hb_002828_020 Hb_002828_020 Hb_001500_110--Hb_002828_020 Hb_009049_020 Hb_009049_020 Hb_001500_110--Hb_009049_020 Hb_002876_320 Hb_002876_320 Hb_001500_110--Hb_002876_320 Hb_029866_100 Hb_029866_100 Hb_001500_110--Hb_029866_100 Hb_012322_020 Hb_012322_020 Hb_001500_110--Hb_012322_020 Hb_000617_100 Hb_000617_100 Hb_001500_110--Hb_000617_100 Hb_030736_070 Hb_030736_070 Hb_027760_070--Hb_030736_070 Hb_000139_130 Hb_000139_130 Hb_027760_070--Hb_000139_130 Hb_000457_140 Hb_000457_140 Hb_027760_070--Hb_000457_140 Hb_000359_140 Hb_000359_140 Hb_027760_070--Hb_000359_140 Hb_027760_070--Hb_146081_010 Hb_008143_070 Hb_008143_070 Hb_027760_070--Hb_008143_070 Hb_000322_070 Hb_000322_070 Hb_146081_010--Hb_000322_070 Hb_162060_010 Hb_162060_010 Hb_146081_010--Hb_162060_010 Hb_146081_010--Hb_030736_070 Hb_001114_110 Hb_001114_110 Hb_146081_010--Hb_001114_110 Hb_000116_150 Hb_000116_150 Hb_146081_010--Hb_000116_150 Hb_145880_010 Hb_145880_010 Hb_146081_010--Hb_145880_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
83.5242 94.2228 54.4358 224.8 68.4219 119.223
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
45.9878 29.2985 68.0165 105.689 34.1896

CAGE analysis