Hb_000270_520

Information

Type -
Description -
Location Contig270: 398662-404961
Sequence    

Annotation

kegg
ID rcu:RCOM_1512600
description alpha-n-acetylglucosaminidase, putative (EC:3.2.1.50)
nr
ID XP_012080141.1
description PREDICTED: alpha-N-acetylglucosaminidase-like isoform X1 [Jatropha curcas]
swissprot
ID P54802
description Alpha-N-acetylglucosaminidase OS=Homo sapiens GN=NAGLU PE=1 SV=2
trembl
ID A0A067K806
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11529 PE=4 SV=1
Gene Ontology
ID GO:0004561
description alpha-n-acetylglucosaminidase-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28235: 386440-404899
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000270_520 0.0 - - PREDICTED: alpha-N-acetylglucosaminidase-like isoform X1 [Jatropha curcas]
2 Hb_142218_020 0.0932213597 - - actin family protein [Populus trichocarpa]
3 Hb_003050_390 0.1014698249 - - PREDICTED: uncharacterized protein LOC104442543 [Eucalyptus grandis]
4 Hb_000270_510 0.1055631934 - - hypothetical protein CISIN_1g008173mg [Citrus sinensis]
5 Hb_005137_040 0.110451107 - - hypothetical protein JCGZ_12324 [Jatropha curcas]
6 Hb_000703_150 0.1122893134 - - PREDICTED: F-box/LRR-repeat MAX2 homolog A [Jatropha curcas]
7 Hb_000035_200 0.1133395911 - - PREDICTED: phospholipase D Z-like [Jatropha curcas]
8 Hb_002909_140 0.1164373567 - - PREDICTED: D-xylose-proton symporter-like 2 [Jatropha curcas]
9 Hb_010368_060 0.119801854 - - conserved hypothetical protein [Ricinus communis]
10 Hb_145880_010 0.1204515989 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
11 Hb_003640_040 0.1210781748 - - PREDICTED: uncharacterized protein LOC105647348 [Jatropha curcas]
12 Hb_000072_120 0.1231681502 - - serine/threonine protein kinase, putative [Ricinus communis]
13 Hb_009083_070 0.1235264552 - - PREDICTED: uncharacterized protein LOC105639870 [Jatropha curcas]
14 Hb_000083_120 0.1271683971 - - transcription factor, putative [Ricinus communis]
15 Hb_005918_010 0.127242028 - - PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Jatropha curcas]
16 Hb_002056_090 0.1272832295 transcription factor TF Family: GNAT PREDICTED: probable acetyltransferase NATA1-like [Jatropha curcas]
17 Hb_001143_190 0.1285790046 - - PREDICTED: uncharacterized protein LOC105638976 [Jatropha curcas]
18 Hb_000483_310 0.1288861703 - - PREDICTED: WD-40 repeat-containing protein MSI4-like [Jatropha curcas]
19 Hb_011016_050 0.1289611887 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI7 isoform X1 [Jatropha curcas]
20 Hb_002111_070 0.1296121614 - - PREDICTED: protein S-acyltransferase 24 [Jatropha curcas]

Gene co-expression network

sample Hb_000270_520 Hb_000270_520 Hb_142218_020 Hb_142218_020 Hb_000270_520--Hb_142218_020 Hb_003050_390 Hb_003050_390 Hb_000270_520--Hb_003050_390 Hb_000270_510 Hb_000270_510 Hb_000270_520--Hb_000270_510 Hb_005137_040 Hb_005137_040 Hb_000270_520--Hb_005137_040 Hb_000703_150 Hb_000703_150 Hb_000270_520--Hb_000703_150 Hb_000035_200 Hb_000035_200 Hb_000270_520--Hb_000035_200 Hb_009083_070 Hb_009083_070 Hb_142218_020--Hb_009083_070 Hb_007380_140 Hb_007380_140 Hb_142218_020--Hb_007380_140 Hb_002686_040 Hb_002686_040 Hb_142218_020--Hb_002686_040 Hb_142218_020--Hb_005137_040 Hb_005918_010 Hb_005918_010 Hb_142218_020--Hb_005918_010 Hb_004129_070 Hb_004129_070 Hb_142218_020--Hb_004129_070 Hb_003050_390--Hb_000270_510 Hb_000080_150 Hb_000080_150 Hb_003050_390--Hb_000080_150 Hb_001135_130 Hb_001135_130 Hb_003050_390--Hb_001135_130 Hb_003528_010 Hb_003528_010 Hb_003050_390--Hb_003528_010 Hb_004204_170 Hb_004204_170 Hb_003050_390--Hb_004204_170 Hb_000270_510--Hb_003528_010 Hb_004324_400 Hb_004324_400 Hb_000270_510--Hb_004324_400 Hb_000270_510--Hb_001135_130 Hb_000270_510--Hb_000035_200 Hb_005137_040--Hb_005918_010 Hb_000637_110 Hb_000637_110 Hb_005137_040--Hb_000637_110 Hb_012506_030 Hb_012506_030 Hb_005137_040--Hb_012506_030 Hb_105105_010 Hb_105105_010 Hb_005137_040--Hb_105105_010 Hb_000088_170 Hb_000088_170 Hb_005137_040--Hb_000088_170 Hb_000441_220 Hb_000441_220 Hb_005137_040--Hb_000441_220 Hb_002111_070 Hb_002111_070 Hb_000703_150--Hb_002111_070 Hb_004676_010 Hb_004676_010 Hb_000703_150--Hb_004676_010 Hb_000739_100 Hb_000739_100 Hb_000703_150--Hb_000739_100 Hb_000390_320 Hb_000390_320 Hb_000703_150--Hb_000390_320 Hb_000083_120 Hb_000083_120 Hb_000703_150--Hb_000083_120 Hb_009615_170 Hb_009615_170 Hb_000703_150--Hb_009615_170 Hb_000146_040 Hb_000146_040 Hb_000035_200--Hb_000146_040 Hb_000696_010 Hb_000696_010 Hb_000035_200--Hb_000696_010 Hb_131035_010 Hb_131035_010 Hb_000035_200--Hb_131035_010 Hb_001500_110 Hb_001500_110 Hb_000035_200--Hb_001500_110 Hb_004970_140 Hb_004970_140 Hb_000035_200--Hb_004970_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.12567 2.79951 2.52264 3.83831 2.38468 3.1619
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.17605 1.24909 4.18023 3.22934 0.969905

CAGE analysis