Hb_000035_200

Information

Type -
Description -
Location Contig35: 257987-261783
Sequence    

Annotation

kegg
ID rcu:RCOM_0920890
description hypothetical protein
nr
ID XP_012076426.1
description PREDICTED: phospholipase D Z-like [Jatropha curcas]
swissprot
ID Q54SA1
description Phospholipase D Z OS=Dictyostelium discoideum GN=pldZ PE=3 SV=1
trembl
ID A0A067KBJ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07083 PE=4 SV=1
Gene Ontology
ID GO:0003824
description phospholipase d z-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000035_200 0.0 - - PREDICTED: phospholipase D Z-like [Jatropha curcas]
2 Hb_000146_040 0.101501233 - - PREDICTED: reticulon-like protein B11 [Jatropha curcas]
3 Hb_000696_010 0.102886103 - - RING-H2 finger protein ATL4M, putative [Ricinus communis]
4 Hb_131035_010 0.1098427943 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_001500_110 0.1115318883 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_000270_520 0.1133395911 - - PREDICTED: alpha-N-acetylglucosaminidase-like isoform X1 [Jatropha curcas]
7 Hb_004970_140 0.1139689619 - - PREDICTED: uncharacterized protein LOC105633635 [Jatropha curcas]
8 Hb_000172_510 0.1147437882 - - hypothetical protein B456_007G243100 [Gossypium raimondii]
9 Hb_001227_130 0.1155459804 - - PREDICTED: delta(14)-sterol reductase [Jatropha curcas]
10 Hb_142218_020 0.1190788656 - - actin family protein [Populus trichocarpa]
11 Hb_006002_040 0.1207691009 - - PREDICTED: uncharacterized protein LOC105638085 [Jatropha curcas]
12 Hb_000270_510 0.1235339329 - - hypothetical protein CISIN_1g008173mg [Citrus sinensis]
13 Hb_011282_060 0.1236615162 - - PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase 1 [Jatropha curcas]
14 Hb_014834_050 0.1246892849 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002102_030 0.1256131488 - - -
16 Hb_000159_090 0.1256347128 - - hypothetical protein POPTR_0015s153201g, partial [Populus trichocarpa]
17 Hb_000107_080 0.1269233587 - - PREDICTED: uncharacterized protein LOC105641009 [Jatropha curcas]
18 Hb_002375_040 0.1270463478 - - PREDICTED: 15 kDa selenoprotein [Jatropha curcas]
19 Hb_000025_630 0.1283257181 - - PREDICTED: uncharacterized protein LOC105635952 [Jatropha curcas]
20 Hb_000352_300 0.1284977308 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]

Gene co-expression network

sample Hb_000035_200 Hb_000035_200 Hb_000146_040 Hb_000146_040 Hb_000035_200--Hb_000146_040 Hb_000696_010 Hb_000696_010 Hb_000035_200--Hb_000696_010 Hb_131035_010 Hb_131035_010 Hb_000035_200--Hb_131035_010 Hb_001500_110 Hb_001500_110 Hb_000035_200--Hb_001500_110 Hb_000270_520 Hb_000270_520 Hb_000035_200--Hb_000270_520 Hb_004970_140 Hb_004970_140 Hb_000035_200--Hb_004970_140 Hb_000140_350 Hb_000140_350 Hb_000146_040--Hb_000140_350 Hb_033286_010 Hb_033286_010 Hb_000146_040--Hb_033286_010 Hb_004102_170 Hb_004102_170 Hb_000146_040--Hb_004102_170 Hb_000477_100 Hb_000477_100 Hb_000146_040--Hb_000477_100 Hb_007481_010 Hb_007481_010 Hb_000146_040--Hb_007481_010 Hb_005797_010 Hb_005797_010 Hb_000146_040--Hb_005797_010 Hb_001191_110 Hb_001191_110 Hb_000696_010--Hb_001191_110 Hb_003671_010 Hb_003671_010 Hb_000696_010--Hb_003671_010 Hb_000696_010--Hb_000146_040 Hb_002375_040 Hb_002375_040 Hb_000696_010--Hb_002375_040 Hb_000696_010--Hb_005797_010 Hb_000696_010--Hb_033286_010 Hb_002192_030 Hb_002192_030 Hb_131035_010--Hb_002192_030 Hb_007286_020 Hb_007286_020 Hb_131035_010--Hb_007286_020 Hb_131035_010--Hb_001500_110 Hb_027760_070 Hb_027760_070 Hb_131035_010--Hb_027760_070 Hb_146081_010 Hb_146081_010 Hb_131035_010--Hb_146081_010 Hb_002828_020 Hb_002828_020 Hb_001500_110--Hb_002828_020 Hb_009049_020 Hb_009049_020 Hb_001500_110--Hb_009049_020 Hb_002876_320 Hb_002876_320 Hb_001500_110--Hb_002876_320 Hb_029866_100 Hb_029866_100 Hb_001500_110--Hb_029866_100 Hb_012322_020 Hb_012322_020 Hb_001500_110--Hb_012322_020 Hb_000617_100 Hb_000617_100 Hb_001500_110--Hb_000617_100 Hb_142218_020 Hb_142218_020 Hb_000270_520--Hb_142218_020 Hb_003050_390 Hb_003050_390 Hb_000270_520--Hb_003050_390 Hb_000270_510 Hb_000270_510 Hb_000270_520--Hb_000270_510 Hb_005137_040 Hb_005137_040 Hb_000270_520--Hb_005137_040 Hb_000703_150 Hb_000703_150 Hb_000270_520--Hb_000703_150 Hb_000212_380 Hb_000212_380 Hb_004970_140--Hb_000212_380 Hb_004970_140--Hb_002375_040 Hb_002660_150 Hb_002660_150 Hb_004970_140--Hb_002660_150 Hb_011282_060 Hb_011282_060 Hb_004970_140--Hb_011282_060 Hb_000184_240 Hb_000184_240 Hb_004970_140--Hb_000184_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.18724 1.05466 1.45761 3.38289 1.52389 2.21145
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.04537 0.801921 1.74794 1.81035 0.519284

CAGE analysis