Hb_146081_010

Information

Type -
Description -
Location Contig146081: 2-402
Sequence    

Annotation

kegg
ID rcu:RCOM_1516720
description signal transducer, putative
nr
ID XP_012070298.1
description PREDICTED: protein SCAI [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KTN7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02606 PE=4 SV=1
Gene Ontology
ID GO:0003714
description protein scai

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_146081_010 0.0 - - PREDICTED: protein SCAI [Jatropha curcas]
2 Hb_000322_070 0.0829105946 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1 [Jatropha curcas]
3 Hb_162060_010 0.08637873 - - conserved hypothetical protein [Ricinus communis]
4 Hb_030736_070 0.0964282589 - - PREDICTED: general transcription factor IIH subunit 3 isoform X2 [Jatropha curcas]
5 Hb_001114_110 0.0989662979 - - PREDICTED: probable ubiquitin-like-specific protease 2A isoform X1 [Jatropha curcas]
6 Hb_000116_150 0.1035077129 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
7 Hb_145880_010 0.1062608469 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
8 Hb_015026_130 0.1064871299 - - quinone oxidoreductase, putative [Ricinus communis]
9 Hb_184798_080 0.1070720889 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Jatropha curcas]
10 Hb_027760_070 0.107161748 - - PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Jatropha curcas]
11 Hb_001205_200 0.1073911887 - - conserved hypothetical protein [Ricinus communis]
12 Hb_009787_050 0.1095919745 - - (Di)nucleoside polyphosphate hydrolase, putative [Ricinus communis]
13 Hb_006198_020 0.1102328949 - - PREDICTED: uncharacterized protein LOC105644416 [Jatropha curcas]
14 Hb_000692_150 0.1104901346 - - PREDICTED: probable prolyl 4-hydroxylase 3 [Jatropha curcas]
15 Hb_000046_570 0.1108898512 - - hypothetical protein JCGZ_01998 [Jatropha curcas]
16 Hb_056987_010 0.1108899322 - - DNA-damage-repair/toleration protein DRT111, chloroplastic [Glycine soja]
17 Hb_001489_100 0.1112875674 - - PREDICTED: hypersensitive-induced response protein 2 [Jatropha curcas]
18 Hb_005460_050 0.1121878221 - - COR413-PM2, putative [Ricinus communis]
19 Hb_002983_080 0.1123549959 - - acetylornithine aminotransferase, partial [Prunus persica]
20 Hb_005723_020 0.113441351 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_146081_010 Hb_146081_010 Hb_000322_070 Hb_000322_070 Hb_146081_010--Hb_000322_070 Hb_162060_010 Hb_162060_010 Hb_146081_010--Hb_162060_010 Hb_030736_070 Hb_030736_070 Hb_146081_010--Hb_030736_070 Hb_001114_110 Hb_001114_110 Hb_146081_010--Hb_001114_110 Hb_000116_150 Hb_000116_150 Hb_146081_010--Hb_000116_150 Hb_145880_010 Hb_145880_010 Hb_146081_010--Hb_145880_010 Hb_000009_400 Hb_000009_400 Hb_000322_070--Hb_000009_400 Hb_000046_570 Hb_000046_570 Hb_000322_070--Hb_000046_570 Hb_000322_070--Hb_162060_010 Hb_003617_020 Hb_003617_020 Hb_000322_070--Hb_003617_020 Hb_008253_020 Hb_008253_020 Hb_000322_070--Hb_008253_020 Hb_000390_250 Hb_000390_250 Hb_000322_070--Hb_000390_250 Hb_000635_040 Hb_000635_040 Hb_162060_010--Hb_000635_040 Hb_000096_120 Hb_000096_120 Hb_162060_010--Hb_000096_120 Hb_008226_090 Hb_008226_090 Hb_162060_010--Hb_008226_090 Hb_162060_010--Hb_000009_400 Hb_027760_070 Hb_027760_070 Hb_030736_070--Hb_027760_070 Hb_008143_070 Hb_008143_070 Hb_030736_070--Hb_008143_070 Hb_001033_050 Hb_001033_050 Hb_030736_070--Hb_001033_050 Hb_000457_140 Hb_000457_140 Hb_030736_070--Hb_000457_140 Hb_000237_190 Hb_000237_190 Hb_030736_070--Hb_000237_190 Hb_015026_130 Hb_015026_130 Hb_001114_110--Hb_015026_130 Hb_021165_010 Hb_021165_010 Hb_001114_110--Hb_021165_010 Hb_000962_030 Hb_000962_030 Hb_001114_110--Hb_000962_030 Hb_031527_030 Hb_031527_030 Hb_001114_110--Hb_031527_030 Hb_016172_030 Hb_016172_030 Hb_001114_110--Hb_016172_030 Hb_001434_080 Hb_001434_080 Hb_001114_110--Hb_001434_080 Hb_009247_010 Hb_009247_010 Hb_000116_150--Hb_009247_010 Hb_000890_030 Hb_000890_030 Hb_000116_150--Hb_000890_030 Hb_000116_150--Hb_000390_250 Hb_091675_010 Hb_091675_010 Hb_000116_150--Hb_091675_010 Hb_000098_050 Hb_000098_050 Hb_000116_150--Hb_000098_050 Hb_009083_070 Hb_009083_070 Hb_145880_010--Hb_009083_070 Hb_001318_020 Hb_001318_020 Hb_145880_010--Hb_001318_020 Hb_184798_080 Hb_184798_080 Hb_145880_010--Hb_184798_080 Hb_006922_010 Hb_006922_010 Hb_145880_010--Hb_006922_010 Hb_008160_030 Hb_008160_030 Hb_145880_010--Hb_008160_030 Hb_001205_200 Hb_001205_200 Hb_145880_010--Hb_001205_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
40.6468 80.8353 56.2526 103.243 48.7664 73.4811
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
26.1579 38.1243 35.0393 54.2268 20.9049

CAGE analysis