Hb_009247_010

Information

Type -
Description -
Location Contig9247: 3901-7693
Sequence    

Annotation

kegg
ID pop:POPTR_0010s12600g
description POPTRDRAFT_833599; thioredoxin family protein
nr
ID XP_012075680.1
description PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
swissprot
ID Q9ZU40
description Sulfhydryl oxidase 2 OS=Arabidopsis thaliana GN=QSOX2 PE=2 SV=2
trembl
ID A0A067KT04
description Sulfhydryl oxidase OS=Jatropha curcas GN=JCGZ_09267 PE=4 SV=1
Gene Ontology
ID GO:0005623
description thioredoxin family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009247_010 0.0 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
2 Hb_000098_050 0.0736781982 - - BnaCnng11900D [Brassica napus]
3 Hb_000116_150 0.0880774132 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
4 Hb_005062_110 0.106917776 - - PREDICTED: transmembrane 9 superfamily member 1 [Jatropha curcas]
5 Hb_000890_030 0.1090907892 - - plastid CUL1 [Hevea brasiliensis]
6 Hb_000818_100 0.1148782109 - - PREDICTED: delta(24)-sterol reductase [Jatropha curcas]
7 Hb_009222_070 0.1173115544 - - PREDICTED: xylosyltransferase 2 [Jatropha curcas]
8 Hb_086639_080 0.1186014336 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000085_260 0.1191398322 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
10 Hb_004987_020 0.1192917843 - - -
11 Hb_000320_290 0.1194803533 - - PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]
12 Hb_000503_020 0.120788948 - - PREDICTED: calcium-dependent protein kinase 13 [Jatropha curcas]
13 Hb_007286_020 0.1208782446 - - hypothetical protein L484_010675 [Morus notabilis]
14 Hb_091675_010 0.1215910788 - - PREDICTED: testis-expressed sequence 10 protein isoform X1 [Jatropha curcas]
15 Hb_000805_210 0.1216208362 - - PREDICTED: oxysterol-binding protein-related protein 3C-like [Jatropha curcas]
16 Hb_012180_010 0.1218278039 - - PREDICTED: (S)-ureidoglycine aminohydrolase [Jatropha curcas]
17 Hb_000580_030 0.1218289716 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
18 Hb_083628_010 0.1222011564 - - PREDICTED: probable serine protease EDA2 [Jatropha curcas]
19 Hb_002486_050 0.1226834795 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
20 Hb_010042_030 0.1243563467 - - PREDICTED: UDP-N-acetylglucosamine diphosphorylase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_009247_010 Hb_009247_010 Hb_000098_050 Hb_000098_050 Hb_009247_010--Hb_000098_050 Hb_000116_150 Hb_000116_150 Hb_009247_010--Hb_000116_150 Hb_005062_110 Hb_005062_110 Hb_009247_010--Hb_005062_110 Hb_000890_030 Hb_000890_030 Hb_009247_010--Hb_000890_030 Hb_000818_100 Hb_000818_100 Hb_009247_010--Hb_000818_100 Hb_009222_070 Hb_009222_070 Hb_009247_010--Hb_009222_070 Hb_000320_290 Hb_000320_290 Hb_000098_050--Hb_000320_290 Hb_000098_050--Hb_005062_110 Hb_000085_260 Hb_000085_260 Hb_000098_050--Hb_000085_260 Hb_000098_050--Hb_000890_030 Hb_044486_020 Hb_044486_020 Hb_000098_050--Hb_044486_020 Hb_146081_010 Hb_146081_010 Hb_000116_150--Hb_146081_010 Hb_000116_150--Hb_000890_030 Hb_000390_250 Hb_000390_250 Hb_000116_150--Hb_000390_250 Hb_091675_010 Hb_091675_010 Hb_000116_150--Hb_091675_010 Hb_000116_150--Hb_000098_050 Hb_005062_110--Hb_000085_260 Hb_010042_030 Hb_010042_030 Hb_005062_110--Hb_010042_030 Hb_001159_030 Hb_001159_030 Hb_005062_110--Hb_001159_030 Hb_000503_020 Hb_000503_020 Hb_005062_110--Hb_000503_020 Hb_000622_110 Hb_000622_110 Hb_005062_110--Hb_000622_110 Hb_002486_050 Hb_002486_050 Hb_005062_110--Hb_002486_050 Hb_000580_030 Hb_000580_030 Hb_000890_030--Hb_000580_030 Hb_012760_030 Hb_012760_030 Hb_000890_030--Hb_012760_030 Hb_016461_020 Hb_016461_020 Hb_000890_030--Hb_016461_020 Hb_000890_030--Hb_044486_020 Hb_000805_210 Hb_000805_210 Hb_000890_030--Hb_000805_210 Hb_029695_050 Hb_029695_050 Hb_000818_100--Hb_029695_050 Hb_000818_100--Hb_009222_070 Hb_000818_100--Hb_000503_020 Hb_000818_100--Hb_000098_050 Hb_000134_120 Hb_000134_120 Hb_000818_100--Hb_000134_120 Hb_009222_070--Hb_000805_210 Hb_009393_200 Hb_009393_200 Hb_009222_070--Hb_009393_200 Hb_083628_010 Hb_083628_010 Hb_009222_070--Hb_083628_010 Hb_002615_070 Hb_002615_070 Hb_009222_070--Hb_002615_070 Hb_001623_110 Hb_001623_110 Hb_009222_070--Hb_001623_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.37248 6.78038 6.52982 13.6518 3.6175 6.70452
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.0931 1.47973 1.82716 4.46128 2.86443

CAGE analysis