Hb_091675_010

Information

Type -
Description -
Location Contig91675: 431-780
Sequence    

Annotation

kegg
ID cit:102624133
description uncharacterized LOC102624133
nr
ID XP_012074326.1
description PREDICTED: testis-expressed sequence 10 protein isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KV24
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08764 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_091675_010 0.0 - - PREDICTED: testis-expressed sequence 10 protein isoform X1 [Jatropha curcas]
2 Hb_000116_150 0.1123269335 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
3 Hb_001493_080 0.1145758308 - - PREDICTED: RING-H2 finger protein ATL3-like [Jatropha curcas]
4 Hb_009247_010 0.1215910788 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
5 Hb_068575_010 0.1307733414 - - PREDICTED: protein GAMETE EXPRESSED 2 [Jatropha curcas]
6 Hb_000098_050 0.132549694 - - BnaCnng11900D [Brassica napus]
7 Hb_000059_200 0.1385851448 - - PREDICTED: WEB family protein At2g38370-like [Jatropha curcas]
8 Hb_000635_200 0.147487604 rubber biosynthesis Gene Name: SRPP5 PREDICTED: REF/SRPP-like protein At1g67360 [Jatropha curcas]
9 Hb_000890_030 0.1503221198 - - plastid CUL1 [Hevea brasiliensis]
10 Hb_000608_260 0.1507306304 - - PREDICTED: probable protein phosphatase 2C 33 [Jatropha curcas]
11 Hb_000739_080 0.1544989263 - - PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Jatropha curcas]
12 Hb_000991_040 0.1571886097 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Gossypium raimondii]
13 Hb_000197_030 0.1572428349 - - hypothetical protein RCOM_1447500 [Ricinus communis]
14 Hb_004987_020 0.1581910629 - - -
15 Hb_000085_260 0.1608546085 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
16 Hb_000931_020 0.1638607388 - - PREDICTED: uncharacterized protein LOC105649774 isoform X1 [Jatropha curcas]
17 Hb_027136_010 0.1658713295 - - hypothetical protein L484_010426 [Morus notabilis]
18 Hb_000418_010 0.1662197106 - - PREDICTED: repressor of RNA polymerase III transcription MAF1 homolog [Jatropha curcas]
19 Hb_000260_600 0.1664657455 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001489_100 0.1669991108 - - PREDICTED: hypersensitive-induced response protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_091675_010 Hb_091675_010 Hb_000116_150 Hb_000116_150 Hb_091675_010--Hb_000116_150 Hb_001493_080 Hb_001493_080 Hb_091675_010--Hb_001493_080 Hb_009247_010 Hb_009247_010 Hb_091675_010--Hb_009247_010 Hb_068575_010 Hb_068575_010 Hb_091675_010--Hb_068575_010 Hb_000098_050 Hb_000098_050 Hb_091675_010--Hb_000098_050 Hb_000059_200 Hb_000059_200 Hb_091675_010--Hb_000059_200 Hb_000116_150--Hb_009247_010 Hb_146081_010 Hb_146081_010 Hb_000116_150--Hb_146081_010 Hb_000890_030 Hb_000890_030 Hb_000116_150--Hb_000890_030 Hb_000390_250 Hb_000390_250 Hb_000116_150--Hb_000390_250 Hb_000116_150--Hb_000098_050 Hb_001493_080--Hb_000059_200 Hb_000608_260 Hb_000608_260 Hb_001493_080--Hb_000608_260 Hb_001489_100 Hb_001489_100 Hb_001493_080--Hb_001489_100 Hb_001493_080--Hb_000116_150 Hb_003430_060 Hb_003430_060 Hb_001493_080--Hb_003430_060 Hb_009247_010--Hb_000098_050 Hb_005062_110 Hb_005062_110 Hb_009247_010--Hb_005062_110 Hb_009247_010--Hb_000890_030 Hb_000818_100 Hb_000818_100 Hb_009247_010--Hb_000818_100 Hb_009222_070 Hb_009222_070 Hb_009247_010--Hb_009222_070 Hb_000635_200 Hb_000635_200 Hb_068575_010--Hb_000635_200 Hb_001673_060 Hb_001673_060 Hb_068575_010--Hb_001673_060 Hb_003604_050 Hb_003604_050 Hb_068575_010--Hb_003604_050 Hb_000479_240 Hb_000479_240 Hb_068575_010--Hb_000479_240 Hb_043362_010 Hb_043362_010 Hb_068575_010--Hb_043362_010 Hb_000352_070 Hb_000352_070 Hb_068575_010--Hb_000352_070 Hb_000320_290 Hb_000320_290 Hb_000098_050--Hb_000320_290 Hb_000098_050--Hb_005062_110 Hb_000085_260 Hb_000085_260 Hb_000098_050--Hb_000085_260 Hb_000098_050--Hb_000890_030 Hb_044486_020 Hb_044486_020 Hb_000098_050--Hb_044486_020 Hb_073171_090 Hb_073171_090 Hb_000059_200--Hb_073171_090 Hb_002081_120 Hb_002081_120 Hb_000059_200--Hb_002081_120 Hb_096819_010 Hb_096819_010 Hb_000059_200--Hb_096819_010 Hb_000958_150 Hb_000958_150 Hb_000059_200--Hb_000958_150 Hb_003470_030 Hb_003470_030 Hb_000059_200--Hb_003470_030 Hb_000205_130 Hb_000205_130 Hb_000059_200--Hb_000205_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.83804 18.7364 12.3039 23.2228 6.59634 16.4542
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.61622 1.04752 7.24755 5.90438 6.33751

CAGE analysis