Hb_001673_060

Information

Type -
Description -
Location Contig1673: 90276-94737
Sequence    

Annotation

kegg
ID rcu:RCOM_0421670
description hypothetical protein
nr
ID XP_012074284.1
description PREDICTED: uncharacterized protein LOC105635789 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KW64
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08733 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15449: 90755-91280
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001673_060 0.0 - - PREDICTED: uncharacterized protein LOC105635789 [Jatropha curcas]
2 Hb_000340_080 0.0546698737 - - PREDICTED: isoamylase 2, chloroplastic [Jatropha curcas]
3 Hb_022425_060 0.0967127785 - - PREDICTED: protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 [Jatropha curcas]
4 Hb_005649_080 0.099465485 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
5 Hb_000656_150 0.1008467382 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
6 Hb_010661_010 0.1018581606 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
7 Hb_004128_030 0.1062080289 transcription factor TF Family: MYB-related PREDICTED: protein REVEILLE 8-like isoform X1 [Jatropha curcas]
8 Hb_001828_170 0.1064181595 - - PREDICTED: protein TPLATE [Jatropha curcas]
9 Hb_002928_190 0.1066683112 transcription factor TF Family: RWP-RK PREDICTED: protein NLP4 [Jatropha curcas]
10 Hb_000212_420 0.1072711971 - - PREDICTED: probable protein phosphatase 2C 33 [Jatropha curcas]
11 Hb_068575_010 0.1076737155 - - PREDICTED: protein GAMETE EXPRESSED 2 [Jatropha curcas]
12 Hb_004116_180 0.1082347758 - - PREDICTED: uncharacterized protein LOC105646147 [Jatropha curcas]
13 Hb_006910_060 0.1085246358 - - PREDICTED: MACPF domain-containing protein At1g14780-like [Jatropha curcas]
14 Hb_001405_160 0.1088064244 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Jatropha curcas]
15 Hb_006573_210 0.1089796041 - - PREDICTED: protein SGT1 homolog [Jatropha curcas]
16 Hb_008937_010 0.1121849397 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2 isoform X2 [Jatropha curcas]
17 Hb_000252_210 0.1124569031 - - PREDICTED: uncharacterized protein LOC105644655 [Jatropha curcas]
18 Hb_010315_020 0.1131598734 - - PREDICTED: uncharacterized protein LOC105640834 [Jatropha curcas]
19 Hb_020805_150 0.113511464 - - ubiquitin-protein ligase, putative [Ricinus communis]
20 Hb_002817_060 0.1142942836 - - PREDICTED: coatomer subunit alpha-1 [Jatropha curcas]

Gene co-expression network

sample Hb_001673_060 Hb_001673_060 Hb_000340_080 Hb_000340_080 Hb_001673_060--Hb_000340_080 Hb_022425_060 Hb_022425_060 Hb_001673_060--Hb_022425_060 Hb_005649_080 Hb_005649_080 Hb_001673_060--Hb_005649_080 Hb_000656_150 Hb_000656_150 Hb_001673_060--Hb_000656_150 Hb_010661_010 Hb_010661_010 Hb_001673_060--Hb_010661_010 Hb_004128_030 Hb_004128_030 Hb_001673_060--Hb_004128_030 Hb_000340_080--Hb_022425_060 Hb_002817_060 Hb_002817_060 Hb_000340_080--Hb_002817_060 Hb_001828_170 Hb_001828_170 Hb_000340_080--Hb_001828_170 Hb_000347_300 Hb_000347_300 Hb_000340_080--Hb_000347_300 Hb_000340_080--Hb_005649_080 Hb_022425_060--Hb_001828_170 Hb_020805_150 Hb_020805_150 Hb_022425_060--Hb_020805_150 Hb_001329_200 Hb_001329_200 Hb_022425_060--Hb_001329_200 Hb_010407_080 Hb_010407_080 Hb_022425_060--Hb_010407_080 Hb_007839_020 Hb_007839_020 Hb_022425_060--Hb_007839_020 Hb_003918_030 Hb_003918_030 Hb_022425_060--Hb_003918_030 Hb_002928_190 Hb_002928_190 Hb_005649_080--Hb_002928_190 Hb_001226_110 Hb_001226_110 Hb_005649_080--Hb_001226_110 Hb_170077_010 Hb_170077_010 Hb_005649_080--Hb_170077_010 Hb_005649_080--Hb_020805_150 Hb_000358_220 Hb_000358_220 Hb_005649_080--Hb_000358_220 Hb_003939_060 Hb_003939_060 Hb_005649_080--Hb_003939_060 Hb_005215_020 Hb_005215_020 Hb_000656_150--Hb_005215_020 Hb_002995_040 Hb_002995_040 Hb_000656_150--Hb_002995_040 Hb_000656_150--Hb_000340_080 Hb_000085_450 Hb_000085_450 Hb_000656_150--Hb_000085_450 Hb_004125_130 Hb_004125_130 Hb_000656_150--Hb_004125_130 Hb_010661_010--Hb_004128_030 Hb_001500_030 Hb_001500_030 Hb_010661_010--Hb_001500_030 Hb_127311_010 Hb_127311_010 Hb_010661_010--Hb_127311_010 Hb_000252_210 Hb_000252_210 Hb_010661_010--Hb_000252_210 Hb_003747_210 Hb_003747_210 Hb_010661_010--Hb_003747_210 Hb_002217_090 Hb_002217_090 Hb_004128_030--Hb_002217_090 Hb_002686_230 Hb_002686_230 Hb_004128_030--Hb_002686_230 Hb_004128_030--Hb_001500_030 Hb_004128_030--Hb_010407_080 Hb_004128_030--Hb_003747_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.70267 25.4229 8.81191 23.4472 6.4762 10.7442
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.62578 3.81423 8.99547 9.7419 15.8474

CAGE analysis