Hb_000252_210

Information

Type -
Description -
Location Contig252: 172621-174462
Sequence    

Annotation

kegg
ID rcu:RCOM_0024690
description hypothetical protein
nr
ID XP_012085473.1
description PREDICTED: uncharacterized protein LOC105644655 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K4D6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17807 PE=4 SV=1
Gene Ontology
ID GO:0005515
description armadillo beta-catenin repeat family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000252_210 0.0 - - PREDICTED: uncharacterized protein LOC105644655 [Jatropha curcas]
2 Hb_002071_050 0.0714052399 - - PREDICTED: mitogen-activated protein kinase kinase 5-like [Jatropha curcas]
3 Hb_010661_010 0.0899119938 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
4 Hb_127311_010 0.0999459409 - - hypothetical protein JCGZ_07497 [Jatropha curcas]
5 Hb_000460_060 0.1004482821 - - importin beta-1, putative [Ricinus communis]
6 Hb_001856_220 0.1036942296 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001405_160 0.1122670171 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Jatropha curcas]
8 Hb_001673_060 0.1124569031 - - PREDICTED: uncharacterized protein LOC105635789 [Jatropha curcas]
9 Hb_008937_010 0.1139645494 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2 isoform X2 [Jatropha curcas]
10 Hb_000487_380 0.116094526 - - PREDICTED: protein PAT1 homolog 1 isoform X1 [Jatropha curcas]
11 Hb_004785_030 0.1170124613 transcription factor TF Family: bZIP PREDICTED: transcription factor VIP1 [Jatropha curcas]
12 Hb_020805_150 0.1173479935 - - ubiquitin-protein ligase, putative [Ricinus communis]
13 Hb_000205_240 0.1176962725 - - ubiquitin-protein ligase, putative [Ricinus communis]
14 Hb_001629_060 0.1204493655 transcription factor TF Family: SWI/SNF-SWI3 Flavin-containing amine oxidase domain-containing protein, putative [Ricinus communis]
15 Hb_001411_140 0.1215639519 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2 [Jatropha curcas]
16 Hb_022425_060 0.1223435347 - - PREDICTED: protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 [Jatropha curcas]
17 Hb_006054_030 0.1242275976 - - PREDICTED: protein GPR107-like [Jatropha curcas]
18 Hb_007850_090 0.1246166898 - - PREDICTED: probable galacturonosyltransferase 11 isoform X1 [Jatropha curcas]
19 Hb_003747_210 0.1251305405 - - PREDICTED: uncharacterized protein LOC105630240 [Jatropha curcas]
20 Hb_000340_080 0.1252308561 - - PREDICTED: isoamylase 2, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000252_210 Hb_000252_210 Hb_002071_050 Hb_002071_050 Hb_000252_210--Hb_002071_050 Hb_010661_010 Hb_010661_010 Hb_000252_210--Hb_010661_010 Hb_127311_010 Hb_127311_010 Hb_000252_210--Hb_127311_010 Hb_000460_060 Hb_000460_060 Hb_000252_210--Hb_000460_060 Hb_001856_220 Hb_001856_220 Hb_000252_210--Hb_001856_220 Hb_001405_160 Hb_001405_160 Hb_000252_210--Hb_001405_160 Hb_002071_050--Hb_001405_160 Hb_009028_010 Hb_009028_010 Hb_002071_050--Hb_009028_010 Hb_002071_050--Hb_001856_220 Hb_005015_080 Hb_005015_080 Hb_002071_050--Hb_005015_080 Hb_007850_090 Hb_007850_090 Hb_002071_050--Hb_007850_090 Hb_004128_030 Hb_004128_030 Hb_010661_010--Hb_004128_030 Hb_001500_030 Hb_001500_030 Hb_010661_010--Hb_001500_030 Hb_010661_010--Hb_127311_010 Hb_003747_210 Hb_003747_210 Hb_010661_010--Hb_003747_210 Hb_001673_060 Hb_001673_060 Hb_010661_010--Hb_001673_060 Hb_127311_010--Hb_001856_220 Hb_127311_010--Hb_002071_050 Hb_013241_010 Hb_013241_010 Hb_127311_010--Hb_013241_010 Hb_000015_170 Hb_000015_170 Hb_127311_010--Hb_000015_170 Hb_003605_220 Hb_003605_220 Hb_000460_060--Hb_003605_220 Hb_002387_070 Hb_002387_070 Hb_000460_060--Hb_002387_070 Hb_044653_020 Hb_044653_020 Hb_000460_060--Hb_044653_020 Hb_001410_130 Hb_001410_130 Hb_000460_060--Hb_001410_130 Hb_000941_080 Hb_000941_080 Hb_000460_060--Hb_000941_080 Hb_006054_030 Hb_006054_030 Hb_000460_060--Hb_006054_030 Hb_008937_010 Hb_008937_010 Hb_001856_220--Hb_008937_010 Hb_003181_040 Hb_003181_040 Hb_001856_220--Hb_003181_040 Hb_003918_030 Hb_003918_030 Hb_001856_220--Hb_003918_030 Hb_010407_060 Hb_010407_060 Hb_001856_220--Hb_010407_060 Hb_001545_150 Hb_001545_150 Hb_001856_220--Hb_001545_150 Hb_001473_110 Hb_001473_110 Hb_001405_160--Hb_001473_110 Hb_000347_390 Hb_000347_390 Hb_001405_160--Hb_000347_390 Hb_000836_380 Hb_000836_380 Hb_001405_160--Hb_000836_380 Hb_000347_400 Hb_000347_400 Hb_001405_160--Hb_000347_400 Hb_000017_220 Hb_000017_220 Hb_001405_160--Hb_000017_220 Hb_002307_270 Hb_002307_270 Hb_001405_160--Hb_002307_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.87487 36.0378 7.64024 21.6305 9.28925 8.4774
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.43501 6.05283 13.5501 8.39262 11.4054

CAGE analysis