Hb_003747_210

Information

Type -
Description -
Location Contig3747: 177807-178709
Sequence    

Annotation

kegg
ID tcc:TCM_017387
description Family of Uncharacterized protein function
nr
ID XP_012067399.1
description PREDICTED: uncharacterized protein LOC105630240 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LBL5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26903 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38228: 178550-178866
cDNA
(Sanger)
(ID:Location)		 010_L19.ab1: 178550-178866

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003747_210 0.0 - - PREDICTED: uncharacterized protein LOC105630240 [Jatropha curcas]
2 Hb_000110_300 0.0870808848 - - PREDICTED: uncharacterized protein LOC105642013 [Jatropha curcas]
3 Hb_002217_090 0.0871589681 - - PREDICTED: probable protein phosphatase 2C 13 [Jatropha curcas]
4 Hb_002915_060 0.0948882631 - - PREDICTED: serine/threonine-protein kinase CTR1-like [Jatropha curcas]
5 Hb_010661_010 0.0966872054 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
6 Hb_004128_030 0.0970663024 transcription factor TF Family: MYB-related PREDICTED: protein REVEILLE 8-like isoform X1 [Jatropha curcas]
7 Hb_007576_200 0.0990890266 - - amino acid transporter, putative [Ricinus communis]
8 Hb_001500_030 0.1103927334 - - PREDICTED: uncharacterized protein At2g33490 isoform X2 [Jatropha curcas]
9 Hb_001411_140 0.1132657863 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2 [Jatropha curcas]
10 Hb_001328_080 0.1148789145 - - PREDICTED: importin subunit alpha-1b [Jatropha curcas]
11 Hb_000912_100 0.1155978869 - - PREDICTED: CMP-sialic acid transporter 3-like isoform X2 [Elaeis guineensis]
12 Hb_003599_030 0.1171958834 - - PREDICTED: glucan endo-1,3-beta-glucosidase 4 isoform X3 [Jatropha curcas]
13 Hb_001699_230 0.1183381152 - - PREDICTED: calcium-dependent protein kinase 28 [Jatropha curcas]
14 Hb_001944_020 0.1213912972 - - PREDICTED: uncharacterized protein LOC105636535 [Jatropha curcas]
15 Hb_000676_040 0.1219813051 - - hypothetical protein POPTR_0007s13320g [Populus trichocarpa]
16 Hb_012107_010 0.123246837 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
17 Hb_007839_020 0.1239975067 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000252_210 0.1251305405 - - PREDICTED: uncharacterized protein LOC105644655 [Jatropha curcas]
19 Hb_001257_100 0.1271657006 transcription factor TF Family: E2F-DP PREDICTED: transcription factor E2FB isoform X1 [Jatropha curcas]
20 Hb_022425_060 0.1285412681 - - PREDICTED: protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003747_210 Hb_003747_210 Hb_000110_300 Hb_000110_300 Hb_003747_210--Hb_000110_300 Hb_002217_090 Hb_002217_090 Hb_003747_210--Hb_002217_090 Hb_002915_060 Hb_002915_060 Hb_003747_210--Hb_002915_060 Hb_010661_010 Hb_010661_010 Hb_003747_210--Hb_010661_010 Hb_004128_030 Hb_004128_030 Hb_003747_210--Hb_004128_030 Hb_007576_200 Hb_007576_200 Hb_003747_210--Hb_007576_200 Hb_000110_300--Hb_002217_090 Hb_000110_300--Hb_002915_060 Hb_001956_060 Hb_001956_060 Hb_000110_300--Hb_001956_060 Hb_000012_240 Hb_000012_240 Hb_000110_300--Hb_000012_240 Hb_009646_010 Hb_009646_010 Hb_000110_300--Hb_009646_010 Hb_001500_030 Hb_001500_030 Hb_002217_090--Hb_001500_030 Hb_002217_090--Hb_004128_030 Hb_000912_100 Hb_000912_100 Hb_002217_090--Hb_000912_100 Hb_000711_010 Hb_000711_010 Hb_002217_090--Hb_000711_010 Hb_002876_210 Hb_002876_210 Hb_002217_090--Hb_002876_210 Hb_001328_080 Hb_001328_080 Hb_002915_060--Hb_001328_080 Hb_007839_020 Hb_007839_020 Hb_002915_060--Hb_007839_020 Hb_011360_050 Hb_011360_050 Hb_002915_060--Hb_011360_050 Hb_005215_020 Hb_005215_020 Hb_002915_060--Hb_005215_020 Hb_023344_150 Hb_023344_150 Hb_002915_060--Hb_023344_150 Hb_002982_020 Hb_002982_020 Hb_002915_060--Hb_002982_020 Hb_010661_010--Hb_004128_030 Hb_010661_010--Hb_001500_030 Hb_127311_010 Hb_127311_010 Hb_010661_010--Hb_127311_010 Hb_000252_210 Hb_000252_210 Hb_010661_010--Hb_000252_210 Hb_001673_060 Hb_001673_060 Hb_010661_010--Hb_001673_060 Hb_002686_230 Hb_002686_230 Hb_004128_030--Hb_002686_230 Hb_004128_030--Hb_001500_030 Hb_010407_080 Hb_010407_080 Hb_004128_030--Hb_010407_080 Hb_000371_060 Hb_000371_060 Hb_007576_200--Hb_000371_060 Hb_000676_040 Hb_000676_040 Hb_007576_200--Hb_000676_040 Hb_000656_150 Hb_000656_150 Hb_007576_200--Hb_000656_150 Hb_000302_200 Hb_000302_200 Hb_007576_200--Hb_000302_200 Hb_002122_080 Hb_002122_080 Hb_007576_200--Hb_002122_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.22392 48.4633 13.0508 35.5759 5.8062 9.56833
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.2973 13.6439 12.9217 19.2829 16.2844

CAGE analysis