Hb_000656_150

Information

Type -
Description -
Location Contig656: 100422-102272
Sequence    

Annotation

kegg
ID rcu:RCOM_0392160
description protein binding protein, putative
nr
ID XP_012068853.1
description PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
swissprot
ID Q9LZD3
description Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
trembl
ID A0A067L859
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24674 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000656_150 0.0 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
2 Hb_005215_020 0.0831680009 transcription factor TF Family: MYB PREDICTED: transcription factor MYB44 [Jatropha curcas]
3 Hb_002995_040 0.0997706074 - - PREDICTED: probable serine/threonine-protein kinase dyrk1 isoform X1 [Jatropha curcas]
4 Hb_001673_060 0.1008467382 - - PREDICTED: uncharacterized protein LOC105635789 [Jatropha curcas]
5 Hb_000340_080 0.1044703391 - - PREDICTED: isoamylase 2, chloroplastic [Jatropha curcas]
6 Hb_000085_450 0.1053610166 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 20 [Jatropha curcas]
7 Hb_004125_130 0.1054461095 - - PREDICTED: uncharacterized protein LOC105632153 [Jatropha curcas]
8 Hb_022425_060 0.1078853961 - - PREDICTED: protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 [Jatropha curcas]
9 Hb_007839_020 0.108407691 - - conserved hypothetical protein [Ricinus communis]
10 Hb_019280_010 0.1090013256 - - PREDICTED: F-box protein At5g39450 isoform X2 [Jatropha curcas]
11 Hb_024650_080 0.110220427 - - PREDICTED: BTB/POZ domain-containing protein At3g09030 [Jatropha curcas]
12 Hb_000347_300 0.1106233321 - - PREDICTED: cation/calcium exchanger 4-like [Jatropha curcas]
13 Hb_026198_060 0.1119839826 - - PREDICTED: calcium-dependent protein kinase 11 [Jatropha curcas]
14 Hb_006006_040 0.1121907337 - - S-methyl-5-thioribose kinase isoform 2 [Theobroma cacao]
15 Hb_007576_200 0.1131246965 - - amino acid transporter, putative [Ricinus communis]
16 Hb_022425_030 0.1153923685 - - PREDICTED: casein kinase I [Jatropha curcas]
17 Hb_000089_180 0.1166001608 - - PREDICTED: homoserine kinase-like [Jatropha curcas]
18 Hb_001828_170 0.1188664386 - - PREDICTED: protein TPLATE [Jatropha curcas]
19 Hb_005649_080 0.1210226563 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
20 Hb_010407_080 0.1217093168 - - PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000656_150 Hb_000656_150 Hb_005215_020 Hb_005215_020 Hb_000656_150--Hb_005215_020 Hb_002995_040 Hb_002995_040 Hb_000656_150--Hb_002995_040 Hb_001673_060 Hb_001673_060 Hb_000656_150--Hb_001673_060 Hb_000340_080 Hb_000340_080 Hb_000656_150--Hb_000340_080 Hb_000085_450 Hb_000085_450 Hb_000656_150--Hb_000085_450 Hb_004125_130 Hb_004125_130 Hb_000656_150--Hb_004125_130 Hb_006006_040 Hb_006006_040 Hb_005215_020--Hb_006006_040 Hb_005215_020--Hb_000085_450 Hb_000089_180 Hb_000089_180 Hb_005215_020--Hb_000089_180 Hb_007839_020 Hb_007839_020 Hb_005215_020--Hb_007839_020 Hb_001328_080 Hb_001328_080 Hb_005215_020--Hb_001328_080 Hb_000334_260 Hb_000334_260 Hb_002995_040--Hb_000334_260 Hb_001558_040 Hb_001558_040 Hb_002995_040--Hb_001558_040 Hb_000579_130 Hb_000579_130 Hb_002995_040--Hb_000579_130 Hb_001307_240 Hb_001307_240 Hb_002995_040--Hb_001307_240 Hb_004450_070 Hb_004450_070 Hb_002995_040--Hb_004450_070 Hb_002995_040--Hb_000085_450 Hb_001673_060--Hb_000340_080 Hb_022425_060 Hb_022425_060 Hb_001673_060--Hb_022425_060 Hb_005649_080 Hb_005649_080 Hb_001673_060--Hb_005649_080 Hb_010661_010 Hb_010661_010 Hb_001673_060--Hb_010661_010 Hb_004128_030 Hb_004128_030 Hb_001673_060--Hb_004128_030 Hb_000340_080--Hb_022425_060 Hb_002817_060 Hb_002817_060 Hb_000340_080--Hb_002817_060 Hb_001828_170 Hb_001828_170 Hb_000340_080--Hb_001828_170 Hb_000347_300 Hb_000347_300 Hb_000340_080--Hb_000347_300 Hb_000340_080--Hb_005649_080 Hb_015026_130 Hb_015026_130 Hb_000085_450--Hb_015026_130 Hb_000085_450--Hb_000089_180 Hb_003020_100 Hb_003020_100 Hb_000085_450--Hb_003020_100 Hb_086063_020 Hb_086063_020 Hb_000085_450--Hb_086063_020 Hb_007137_050 Hb_007137_050 Hb_000085_450--Hb_007137_050 Hb_004037_020 Hb_004037_020 Hb_000085_450--Hb_004037_020 Hb_022425_030 Hb_022425_030 Hb_004125_130--Hb_022425_030 Hb_002889_020 Hb_002889_020 Hb_004125_130--Hb_002889_020 Hb_004125_130--Hb_022425_060 Hb_004125_130--Hb_000347_300 Hb_000024_040 Hb_000024_040 Hb_004125_130--Hb_000024_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.71799 9.58145 4.0481 9.78406 1.96194 2.96715
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.66562 1.74209 3.40622 6.72039 5.99906

CAGE analysis