Hb_010661_010

Information

Type -
Description -
Location Contig10661: 10542-13785
Sequence    

Annotation

kegg
ID rcu:RCOM_1584130
description beta-1,3-glucuronyltransferase, putative (EC:2.4.1.135)
nr
ID XP_012068106.1
description PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
swissprot
ID Q9SXC4
description Probable beta-1,4-xylosyltransferase IRX9H OS=Arabidopsis thaliana GN=IRX9H PE=2 SV=2
trembl
ID A0A067L2R8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15945 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable beta- -xylosyltransferase irx9h

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02053: 10594-13761 , PASA_asmbl_02054: 10586-13345
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010661_010 0.0 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
2 Hb_004128_030 0.0793487596 transcription factor TF Family: MYB-related PREDICTED: protein REVEILLE 8-like isoform X1 [Jatropha curcas]
3 Hb_001500_030 0.0805322742 - - PREDICTED: uncharacterized protein At2g33490 isoform X2 [Jatropha curcas]
4 Hb_127311_010 0.0805488522 - - hypothetical protein JCGZ_07497 [Jatropha curcas]
5 Hb_000252_210 0.0899119938 - - PREDICTED: uncharacterized protein LOC105644655 [Jatropha curcas]
6 Hb_003747_210 0.0966872054 - - PREDICTED: uncharacterized protein LOC105630240 [Jatropha curcas]
7 Hb_001673_060 0.1018581606 - - PREDICTED: uncharacterized protein LOC105635789 [Jatropha curcas]
8 Hb_002217_090 0.1018612552 - - PREDICTED: probable protein phosphatase 2C 13 [Jatropha curcas]
9 Hb_001699_230 0.1057820889 - - PREDICTED: calcium-dependent protein kinase 28 [Jatropha curcas]
10 Hb_002071_050 0.1095120682 - - PREDICTED: mitogen-activated protein kinase kinase 5-like [Jatropha curcas]
11 Hb_022425_060 0.1133251774 - - PREDICTED: protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 [Jatropha curcas]
12 Hb_000340_080 0.1175195295 - - PREDICTED: isoamylase 2, chloroplastic [Jatropha curcas]
13 Hb_000417_300 0.1185838477 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [Jatropha curcas]
14 Hb_000649_250 0.1190277918 transcription factor TF Family: C2H2 PREDICTED: UBX domain-containing protein 6 [Jatropha curcas]
15 Hb_000656_390 0.1205308295 - - PREDICTED: probable GTP diphosphokinase RSH2, chloroplastic [Jatropha curcas]
16 Hb_000042_330 0.1207142949 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002686_230 0.122794051 - - ubiquitin-protein ligase, putative [Ricinus communis]
18 Hb_000815_240 0.1228505651 - - PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Jatropha curcas]
19 Hb_007839_020 0.1255093145 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001405_160 0.1257473445 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Jatropha curcas]

Gene co-expression network

sample Hb_010661_010 Hb_010661_010 Hb_004128_030 Hb_004128_030 Hb_010661_010--Hb_004128_030 Hb_001500_030 Hb_001500_030 Hb_010661_010--Hb_001500_030 Hb_127311_010 Hb_127311_010 Hb_010661_010--Hb_127311_010 Hb_000252_210 Hb_000252_210 Hb_010661_010--Hb_000252_210 Hb_003747_210 Hb_003747_210 Hb_010661_010--Hb_003747_210 Hb_001673_060 Hb_001673_060 Hb_010661_010--Hb_001673_060 Hb_002217_090 Hb_002217_090 Hb_004128_030--Hb_002217_090 Hb_002686_230 Hb_002686_230 Hb_004128_030--Hb_002686_230 Hb_004128_030--Hb_001500_030 Hb_010407_080 Hb_010407_080 Hb_004128_030--Hb_010407_080 Hb_004128_030--Hb_003747_210 Hb_001500_030--Hb_002217_090 Hb_000912_100 Hb_000912_100 Hb_001500_030--Hb_000912_100 Hb_002876_210 Hb_002876_210 Hb_001500_030--Hb_002876_210 Hb_001500_030--Hb_003747_210 Hb_127311_010--Hb_000252_210 Hb_001856_220 Hb_001856_220 Hb_127311_010--Hb_001856_220 Hb_002071_050 Hb_002071_050 Hb_127311_010--Hb_002071_050 Hb_013241_010 Hb_013241_010 Hb_127311_010--Hb_013241_010 Hb_000015_170 Hb_000015_170 Hb_127311_010--Hb_000015_170 Hb_000252_210--Hb_002071_050 Hb_000460_060 Hb_000460_060 Hb_000252_210--Hb_000460_060 Hb_000252_210--Hb_001856_220 Hb_001405_160 Hb_001405_160 Hb_000252_210--Hb_001405_160 Hb_000110_300 Hb_000110_300 Hb_003747_210--Hb_000110_300 Hb_003747_210--Hb_002217_090 Hb_002915_060 Hb_002915_060 Hb_003747_210--Hb_002915_060 Hb_007576_200 Hb_007576_200 Hb_003747_210--Hb_007576_200 Hb_000340_080 Hb_000340_080 Hb_001673_060--Hb_000340_080 Hb_022425_060 Hb_022425_060 Hb_001673_060--Hb_022425_060 Hb_005649_080 Hb_005649_080 Hb_001673_060--Hb_005649_080 Hb_000656_150 Hb_000656_150 Hb_001673_060--Hb_000656_150 Hb_001673_060--Hb_004128_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.9155 47.4442 16.1905 33.3821 7.07186 10.0202
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.8073 9.11869 16.235 10.9888 19.6415

CAGE analysis