Hb_003181_040

Information

Type -
Description -
Location Contig3181: 30474-33847
Sequence    

Annotation

kegg
ID rcu:RCOM_1207490
description hypothetical protein
nr
ID XP_012089216.1
description PREDICTED: uncharacterized protein LOC105647655 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L920
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01456 PE=4 SV=1
Gene Ontology
ID GO:0005622
description cruciferin 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33582: 30518-34159
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003181_040 0.0 - - PREDICTED: uncharacterized protein LOC105647655 isoform X1 [Jatropha curcas]
2 Hb_001856_220 0.0808513647 - - conserved hypothetical protein [Ricinus communis]
3 Hb_008937_010 0.0932778214 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2 isoform X2 [Jatropha curcas]
4 Hb_000115_340 0.0936808227 - - PREDICTED: uncharacterized protein LOC105642055 [Jatropha curcas]
5 Hb_001258_020 0.1009909202 - - PREDICTED: protein RMD5 homolog A [Jatropha curcas]
6 Hb_003398_080 0.1031868035 - - PREDICTED: telomere repeat-binding protein 4 isoform X3 [Jatropha curcas]
7 Hb_004553_030 0.1051122019 - - PREDICTED: uncharacterized protein LOC105629320 [Jatropha curcas]
8 Hb_000991_040 0.1073993215 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Gossypium raimondii]
9 Hb_001277_360 0.1079588336 - - PREDICTED: dymeclin isoform X1 [Jatropha curcas]
10 Hb_010407_060 0.1121364663 - - PREDICTED: probable methyltransferase PMT3 [Jatropha curcas]
11 Hb_000130_420 0.1121926779 - - PREDICTED: uncharacterized protein LOC105635728 [Jatropha curcas]
12 Hb_000120_910 0.1136934854 - - plant ubiquilin, putative [Ricinus communis]
13 Hb_000809_170 0.1138181035 - - PREDICTED: guanine nucleotide-binding protein subunit beta-like protein 1 homolog isoform X1 [Jatropha curcas]
14 Hb_002260_050 0.1164728703 - - conserved hypothetical protein [Ricinus communis]
15 Hb_008253_020 0.1171671448 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
16 Hb_003682_030 0.118298382 - - hypothetical protein CICLE_v10020876mg [Citrus clementina]
17 Hb_003666_020 0.1201309772 - - kinase, putative [Ricinus communis]
18 Hb_000635_040 0.1208259336 - - PREDICTED: nuclear pore complex protein NUP54 [Jatropha curcas]
19 Hb_000809_160 0.1208792682 - - hypothetical protein JCGZ_12355 [Jatropha curcas]
20 Hb_000949_020 0.1210207267 transcription factor TF Family: Orphans PREDICTED: ethylene receptor isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_003181_040 Hb_003181_040 Hb_001856_220 Hb_001856_220 Hb_003181_040--Hb_001856_220 Hb_008937_010 Hb_008937_010 Hb_003181_040--Hb_008937_010 Hb_000115_340 Hb_000115_340 Hb_003181_040--Hb_000115_340 Hb_001258_020 Hb_001258_020 Hb_003181_040--Hb_001258_020 Hb_003398_080 Hb_003398_080 Hb_003181_040--Hb_003398_080 Hb_004553_030 Hb_004553_030 Hb_003181_040--Hb_004553_030 Hb_001856_220--Hb_008937_010 Hb_003918_030 Hb_003918_030 Hb_001856_220--Hb_003918_030 Hb_010407_060 Hb_010407_060 Hb_001856_220--Hb_010407_060 Hb_001545_150 Hb_001545_150 Hb_001856_220--Hb_001545_150 Hb_002071_050 Hb_002071_050 Hb_001856_220--Hb_002071_050 Hb_008937_010--Hb_010407_060 Hb_001489_100 Hb_001489_100 Hb_008937_010--Hb_001489_100 Hb_008253_020 Hb_008253_020 Hb_008937_010--Hb_008253_020 Hb_000120_910 Hb_000120_910 Hb_008937_010--Hb_000120_910 Hb_000402_230 Hb_000402_230 Hb_008937_010--Hb_000402_230 Hb_001245_050 Hb_001245_050 Hb_000115_340--Hb_001245_050 Hb_003605_050 Hb_003605_050 Hb_000115_340--Hb_003605_050 Hb_000866_450 Hb_000866_450 Hb_000115_340--Hb_000866_450 Hb_023226_070 Hb_023226_070 Hb_000115_340--Hb_023226_070 Hb_001699_010 Hb_001699_010 Hb_000115_340--Hb_001699_010 Hb_001258_020--Hb_004553_030 Hb_003666_020 Hb_003666_020 Hb_001258_020--Hb_003666_020 Hb_005288_170 Hb_005288_170 Hb_001258_020--Hb_005288_170 Hb_001054_030 Hb_001054_030 Hb_001258_020--Hb_001054_030 Hb_000260_180 Hb_000260_180 Hb_001258_020--Hb_000260_180 Hb_000260_640 Hb_000260_640 Hb_001258_020--Hb_000260_640 Hb_001300_010 Hb_001300_010 Hb_003398_080--Hb_001300_010 Hb_000861_080 Hb_000861_080 Hb_003398_080--Hb_000861_080 Hb_003398_080--Hb_000402_230 Hb_004994_240 Hb_004994_240 Hb_003398_080--Hb_004994_240 Hb_003398_080--Hb_001545_150 Hb_003398_080--Hb_000120_910 Hb_001195_530 Hb_001195_530 Hb_004553_030--Hb_001195_530 Hb_000809_170 Hb_000809_170 Hb_004553_030--Hb_000809_170 Hb_004553_030--Hb_000402_230 Hb_004553_030--Hb_003666_020 Hb_002217_170 Hb_002217_170 Hb_004553_030--Hb_002217_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.65348 27.2276 17.2837 22.4157 18.8418 10.3936
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.0953 8.25548 12.7669 6.39947 11.3872

CAGE analysis