Hb_007850_090

Information

Type -
Description -
Location Contig7850: 100318-104916
Sequence    

Annotation

kegg
ID rcu:RCOM_1468040
description Glycosyltransferase QUASIMODO1, putative
nr
ID XP_012080424.1
description PREDICTED: probable galacturonosyltransferase 11 isoform X1 [Jatropha curcas]
swissprot
ID Q949Q1
description Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1
trembl
ID A0A067K5I3
description Hexosyltransferase OS=Jatropha curcas GN=JCGZ_11758 PE=3 SV=1
Gene Ontology
ID GO:0047262
description probable galacturonosyltransferase 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007850_090 0.0 - - PREDICTED: probable galacturonosyltransferase 11 isoform X1 [Jatropha curcas]
2 Hb_001674_030 0.069259299 - - PREDICTED: BTB/POZ domain-containing protein At2g24240 [Jatropha curcas]
3 Hb_003544_110 0.0897588575 - - PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Jatropha curcas]
4 Hb_000525_010 0.1008437099 - - ring finger protein, putative [Ricinus communis]
5 Hb_000072_120 0.1010292255 - - serine/threonine protein kinase, putative [Ricinus communis]
6 Hb_003078_020 0.1011926969 - - PREDICTED: U-box domain-containing protein 9 [Jatropha curcas]
7 Hb_009627_030 0.1027312401 - - PREDICTED: F-box/kelch-repeat protein At3g23880-like [Jatropha curcas]
8 Hb_002071_050 0.1027353929 - - PREDICTED: mitogen-activated protein kinase kinase 5-like [Jatropha curcas]
9 Hb_001357_040 0.1028669434 transcription factor TF Family: ERF ethylene-responsive transcription factor 3-like [Jatropha curcas]
10 Hb_012564_030 0.1045960759 - - coronatine-insensitive 1 [Hevea brasiliensis]
11 Hb_002046_020 0.1056574224 - - PREDICTED: putative clathrin assembly protein At2g25430 [Jatropha curcas]
12 Hb_048219_010 0.1060369636 - - coronatine-insensitive 1 [Hevea brasiliensis]
13 Hb_000487_380 0.1063694988 - - PREDICTED: protein PAT1 homolog 1 isoform X1 [Jatropha curcas]
14 Hb_006198_020 0.1070093176 - - PREDICTED: uncharacterized protein LOC105644416 [Jatropha curcas]
15 Hb_001405_160 0.107599015 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Jatropha curcas]
16 Hb_003082_010 0.1091019975 - - PREDICTED: putative F-box protein At3g10240 [Jatropha curcas]
17 Hb_000329_230 0.1091968669 - - PREDICTED: uncharacterized protein LOC105643152 [Jatropha curcas]
18 Hb_001864_060 0.1092676142 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1-like [Jatropha curcas]
19 Hb_028962_020 0.1094677116 - - hypothetical protein POPTR_0016s00660g [Populus trichocarpa]
20 Hb_001856_230 0.1096638962 - - PREDICTED: transcription initiation factor TFIID subunit 8 [Jatropha curcas]

Gene co-expression network

sample Hb_007850_090 Hb_007850_090 Hb_001674_030 Hb_001674_030 Hb_007850_090--Hb_001674_030 Hb_003544_110 Hb_003544_110 Hb_007850_090--Hb_003544_110 Hb_000525_010 Hb_000525_010 Hb_007850_090--Hb_000525_010 Hb_000072_120 Hb_000072_120 Hb_007850_090--Hb_000072_120 Hb_003078_020 Hb_003078_020 Hb_007850_090--Hb_003078_020 Hb_009627_030 Hb_009627_030 Hb_007850_090--Hb_009627_030 Hb_001674_030--Hb_000072_120 Hb_000329_230 Hb_000329_230 Hb_001674_030--Hb_000329_230 Hb_003906_200 Hb_003906_200 Hb_001674_030--Hb_003906_200 Hb_000009_500 Hb_000009_500 Hb_001674_030--Hb_000009_500 Hb_000402_230 Hb_000402_230 Hb_001674_030--Hb_000402_230 Hb_001366_310 Hb_001366_310 Hb_003544_110--Hb_001366_310 Hb_012564_030 Hb_012564_030 Hb_003544_110--Hb_012564_030 Hb_002818_030 Hb_002818_030 Hb_003544_110--Hb_002818_030 Hb_003494_020 Hb_003494_020 Hb_003544_110--Hb_003494_020 Hb_004916_010 Hb_004916_010 Hb_003544_110--Hb_004916_010 Hb_048219_010 Hb_048219_010 Hb_003544_110--Hb_048219_010 Hb_000025_330 Hb_000025_330 Hb_000525_010--Hb_000025_330 Hb_001691_150 Hb_001691_150 Hb_000525_010--Hb_001691_150 Hb_000418_070 Hb_000418_070 Hb_000525_010--Hb_000418_070 Hb_003430_060 Hb_003430_060 Hb_000525_010--Hb_003430_060 Hb_000574_100 Hb_000574_100 Hb_000525_010--Hb_000574_100 Hb_001473_160 Hb_001473_160 Hb_000072_120--Hb_001473_160 Hb_000072_120--Hb_000329_230 Hb_000072_120--Hb_003906_200 Hb_004030_080 Hb_004030_080 Hb_000072_120--Hb_004030_080 Hb_001679_050 Hb_001679_050 Hb_000072_120--Hb_001679_050 Hb_000094_310 Hb_000094_310 Hb_003078_020--Hb_000094_310 Hb_000487_380 Hb_000487_380 Hb_003078_020--Hb_000487_380 Hb_008937_010 Hb_008937_010 Hb_003078_020--Hb_008937_010 Hb_000941_130 Hb_000941_130 Hb_003078_020--Hb_000941_130 Hb_004410_120 Hb_004410_120 Hb_003078_020--Hb_004410_120 Hb_001489_100 Hb_001489_100 Hb_003078_020--Hb_001489_100 Hb_006922_010 Hb_006922_010 Hb_009627_030--Hb_006922_010 Hb_005207_050 Hb_005207_050 Hb_009627_030--Hb_005207_050 Hb_009627_030--Hb_003906_200 Hb_007017_040 Hb_007017_040 Hb_009627_030--Hb_007017_040 Hb_010381_030 Hb_010381_030 Hb_009627_030--Hb_010381_030 Hb_001205_200 Hb_001205_200 Hb_009627_030--Hb_001205_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.57537 11.9529 3.17051 9.13302 4.13074 6.84342
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.68562 4.424 7.30578 4.39594 3.47701

CAGE analysis