Hb_000094_310

Information

Type -
Description -
Location Contig94: 237485-239440
Sequence    

Annotation

kegg
ID rcu:RCOM_1593900
description hypothetical protein
nr
ID XP_012071813.1
description PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
swissprot
ID Q9FRK5
description Uncharacterized membrane protein At1g75140 OS=Arabidopsis thaliana GN=At1g75140 PE=1 SV=3
trembl
ID B9R7R8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1593900 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_310 0.0 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
2 Hb_000037_220 0.0679858993 - - PREDICTED: vacuolar protein-sorting-associated protein 11 homolog [Jatropha curcas]
3 Hb_000696_050 0.0722272178 - - PREDICTED: CSC1-like protein At4g35870 [Jatropha curcas]
4 Hb_003078_020 0.0724579289 - - PREDICTED: U-box domain-containing protein 9 [Jatropha curcas]
5 Hb_003729_030 0.0750869802 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [Jatropha curcas]
6 Hb_002311_100 0.0757266 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 11-like [Jatropha curcas]
7 Hb_009615_170 0.0775023376 - - PREDICTED: sphingoid long-chain bases kinase 1 isoform X1 [Jatropha curcas]
8 Hb_004410_120 0.0797763014 - - PREDICTED: uncharacterized protein LOC105633877 isoform X1 [Jatropha curcas]
9 Hb_000260_070 0.081182035 - - kinase, putative [Ricinus communis]
10 Hb_000556_220 0.0812748249 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Jatropha curcas]
11 Hb_000487_380 0.0868504906 - - PREDICTED: protein PAT1 homolog 1 isoform X1 [Jatropha curcas]
12 Hb_000941_130 0.0872375417 - - gamma-tubulin complex component, putative [Ricinus communis]
13 Hb_000680_110 0.0876900151 - - Endosomal P24A protein precursor, putative [Ricinus communis]
14 Hb_005656_040 0.0883337025 desease resistance Gene Name: T2SE ATP-dependent RNA helicase, putative [Ricinus communis]
15 Hb_001913_060 0.0888922729 - - PREDICTED: splicing factor 3B subunit 3-like [Jatropha curcas]
16 Hb_061878_010 0.0900282462 - - hypothetical protein CISIN_1g0094072mg, partial [Citrus sinensis]
17 Hb_000723_220 0.0904701591 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
18 Hb_002111_070 0.0911043758 - - PREDICTED: protein S-acyltransferase 24 [Jatropha curcas]
19 Hb_000174_290 0.0921749008 - - PREDICTED: conserved oligomeric Golgi complex subunit 1 [Jatropha curcas]
20 Hb_013358_010 0.0923480775 - - hypothetical protein JCGZ_07102 [Jatropha curcas]

Gene co-expression network

sample Hb_000094_310 Hb_000094_310 Hb_000037_220 Hb_000037_220 Hb_000094_310--Hb_000037_220 Hb_000696_050 Hb_000696_050 Hb_000094_310--Hb_000696_050 Hb_003078_020 Hb_003078_020 Hb_000094_310--Hb_003078_020 Hb_003729_030 Hb_003729_030 Hb_000094_310--Hb_003729_030 Hb_002311_100 Hb_002311_100 Hb_000094_310--Hb_002311_100 Hb_009615_170 Hb_009615_170 Hb_000094_310--Hb_009615_170 Hb_005563_060 Hb_005563_060 Hb_000037_220--Hb_005563_060 Hb_000556_220 Hb_000556_220 Hb_000037_220--Hb_000556_220 Hb_000003_100 Hb_000003_100 Hb_000037_220--Hb_000003_100 Hb_140049_080 Hb_140049_080 Hb_000037_220--Hb_140049_080 Hb_041327_010 Hb_041327_010 Hb_000037_220--Hb_041327_010 Hb_012395_140 Hb_012395_140 Hb_000696_050--Hb_012395_140 Hb_004182_050 Hb_004182_050 Hb_000696_050--Hb_004182_050 Hb_000723_220 Hb_000723_220 Hb_000696_050--Hb_000723_220 Hb_001550_060 Hb_001550_060 Hb_000696_050--Hb_001550_060 Hb_000213_010 Hb_000213_010 Hb_000696_050--Hb_000213_010 Hb_000487_380 Hb_000487_380 Hb_003078_020--Hb_000487_380 Hb_008937_010 Hb_008937_010 Hb_003078_020--Hb_008937_010 Hb_000941_130 Hb_000941_130 Hb_003078_020--Hb_000941_130 Hb_004410_120 Hb_004410_120 Hb_003078_020--Hb_004410_120 Hb_001489_100 Hb_001489_100 Hb_003078_020--Hb_001489_100 Hb_000321_150 Hb_000321_150 Hb_003729_030--Hb_000321_150 Hb_000069_470 Hb_000069_470 Hb_003729_030--Hb_000069_470 Hb_002253_080 Hb_002253_080 Hb_003729_030--Hb_002253_080 Hb_000120_660 Hb_000120_660 Hb_003729_030--Hb_000120_660 Hb_000260_070 Hb_000260_070 Hb_003729_030--Hb_000260_070 Hb_011242_060 Hb_011242_060 Hb_003729_030--Hb_011242_060 Hb_005656_040 Hb_005656_040 Hb_002311_100--Hb_005656_040 Hb_002311_100--Hb_000556_220 Hb_002311_100--Hb_000723_220 Hb_009898_010 Hb_009898_010 Hb_002311_100--Hb_009898_010 Hb_002311_100--Hb_000696_050 Hb_001821_090 Hb_001821_090 Hb_009615_170--Hb_001821_090 Hb_009615_170--Hb_012395_140 Hb_004884_150 Hb_004884_150 Hb_009615_170--Hb_004884_150 Hb_159558_010 Hb_159558_010 Hb_009615_170--Hb_159558_010 Hb_000579_230 Hb_000579_230 Hb_009615_170--Hb_000579_230 Hb_000174_060 Hb_000174_060 Hb_009615_170--Hb_000174_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
26.7238 44.7314 13.1803 32.17 31.0493 30.984
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.0985 9.53758 29.3551 30.8476 22.0266

CAGE analysis