Hb_012395_140

Information

Type -
Description -
Location Contig12395: 58989-65578
Sequence    

Annotation

kegg
ID rcu:RCOM_1217780
description hypothetical protein
nr
ID XP_012077593.1
description PREDICTED: uncharacterized protein LOC105638411 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KAR6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12860 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07269: 59028-65478 , PASA_asmbl_07270: 60627-65294 , PASA_asmbl_07271: 64033-64888
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012395_140 0.0 - - PREDICTED: uncharacterized protein LOC105638411 [Jatropha curcas]
2 Hb_000395_070 0.0454003046 - - PREDICTED: serine/threonine-protein kinase BLUS1 isoform X2 [Jatropha curcas]
3 Hb_001550_060 0.0464800714 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X4 [Jatropha curcas]
4 Hb_000579_230 0.0492373563 - - PREDICTED: bifunctional nuclease 1 [Jatropha curcas]
5 Hb_002329_040 0.0506205769 - - PREDICTED: uncharacterized protein LOC105648065 [Jatropha curcas]
6 Hb_002815_030 0.0518353541 - - hypothetical protein CISIN_1g0095162mg, partial [Citrus sinensis]
7 Hb_001814_030 0.0524139115 - - PREDICTED: uncharacterized protein LOC105650634 [Jatropha curcas]
8 Hb_001195_320 0.0563402088 - - PREDICTED: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase [Jatropha curcas]
9 Hb_009615_170 0.058167629 - - PREDICTED: sphingoid long-chain bases kinase 1 isoform X1 [Jatropha curcas]
10 Hb_001369_130 0.0584885233 - - PREDICTED: autophagy-related protein 3 isoform X1 [Jatropha curcas]
11 Hb_004182_050 0.0585443642 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X2 [Jatropha curcas]
12 Hb_000975_040 0.0586708449 - - hypothetical protein CICLE_v10028249mg [Citrus clementina]
13 Hb_000671_070 0.0615154353 - - PREDICTED: uncharacterized protein LOC105630621 [Jatropha curcas]
14 Hb_159558_010 0.0615376056 - - PREDICTED: uncharacterized protein LOC105635846 [Jatropha curcas]
15 Hb_006420_040 0.0616733814 transcription factor TF Family: Orphans PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X2 [Jatropha curcas]
16 Hb_001343_040 0.0621314175 - - PREDICTED: uncharacterized protein LOC105638555 [Jatropha curcas]
17 Hb_004676_010 0.0626646197 - - PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Jatropha curcas]
18 Hb_009270_020 0.0635074641 - - PREDICTED: LOW QUALITY PROTEIN: helicase and polymerase-containing protein TEBICHI [Jatropha curcas]
19 Hb_027380_140 0.0638946398 - - PREDICTED: uncharacterized protein LOC105634023 isoform X1 [Jatropha curcas]
20 Hb_008024_030 0.0644413806 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105648348 [Jatropha curcas]

Gene co-expression network

sample Hb_012395_140 Hb_012395_140 Hb_000395_070 Hb_000395_070 Hb_012395_140--Hb_000395_070 Hb_001550_060 Hb_001550_060 Hb_012395_140--Hb_001550_060 Hb_000579_230 Hb_000579_230 Hb_012395_140--Hb_000579_230 Hb_002329_040 Hb_002329_040 Hb_012395_140--Hb_002329_040 Hb_002815_030 Hb_002815_030 Hb_012395_140--Hb_002815_030 Hb_001814_030 Hb_001814_030 Hb_012395_140--Hb_001814_030 Hb_000740_100 Hb_000740_100 Hb_000395_070--Hb_000740_100 Hb_003060_060 Hb_003060_060 Hb_000395_070--Hb_003060_060 Hb_000412_010 Hb_000412_010 Hb_000395_070--Hb_000412_010 Hb_000395_070--Hb_002815_030 Hb_000395_070--Hb_000579_230 Hb_006420_040 Hb_006420_040 Hb_001550_060--Hb_006420_040 Hb_003206_130 Hb_003206_130 Hb_001550_060--Hb_003206_130 Hb_000025_320 Hb_000025_320 Hb_001550_060--Hb_000025_320 Hb_001195_320 Hb_001195_320 Hb_001550_060--Hb_001195_320 Hb_001550_060--Hb_000395_070 Hb_000579_230--Hb_002815_030 Hb_104061_020 Hb_104061_020 Hb_000579_230--Hb_104061_020 Hb_009270_020 Hb_009270_020 Hb_000579_230--Hb_009270_020 Hb_004676_010 Hb_004676_010 Hb_000579_230--Hb_004676_010 Hb_002107_070 Hb_002107_070 Hb_002329_040--Hb_002107_070 Hb_027380_140 Hb_027380_140 Hb_002329_040--Hb_027380_140 Hb_002329_040--Hb_000740_100 Hb_002329_040--Hb_001195_320 Hb_000183_020 Hb_000183_020 Hb_002329_040--Hb_000183_020 Hb_001343_040 Hb_001343_040 Hb_002815_030--Hb_001343_040 Hb_000008_290 Hb_000008_290 Hb_002815_030--Hb_000008_290 Hb_000592_030 Hb_000592_030 Hb_002815_030--Hb_000592_030 Hb_004586_220 Hb_004586_220 Hb_001814_030--Hb_004586_220 Hb_002205_250 Hb_002205_250 Hb_001814_030--Hb_002205_250 Hb_000614_210 Hb_000614_210 Hb_001814_030--Hb_000614_210 Hb_159558_010 Hb_159558_010 Hb_001814_030--Hb_159558_010 Hb_020378_030 Hb_020378_030 Hb_001814_030--Hb_020378_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.0534 12.7425 7.69831 9.72472 12.6455 12.4631
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.22406 5.87451 9.07523 11.9523 10.9559

CAGE analysis