Hb_000723_220

Information

Type -
Description -
Location Contig723: 214945-216372
Sequence    

Annotation

kegg
ID rcu:RCOM_1355450
description hypothetical protein
nr
ID XP_012082377.1
description PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KBE0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16523 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55774: 209394-216402
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000723_220 0.0 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
2 Hb_000230_260 0.067156528 - - PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Jatropha curcas]
3 Hb_006637_020 0.0680412754 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
4 Hb_017358_040 0.06905095 - - PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
5 Hb_001195_470 0.0705426529 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
6 Hb_085781_020 0.0726784902 - - PREDICTED: extra-large guanine nucleotide-binding protein 1 [Jatropha curcas]
7 Hb_071130_010 0.0733332523 - - PREDICTED: E3 ubiquitin-protein ligase UPL1 isoform X1 [Jatropha curcas]
8 Hb_002311_100 0.0733462723 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 11-like [Jatropha curcas]
9 Hb_000696_050 0.0734197132 - - PREDICTED: CSC1-like protein At4g35870 [Jatropha curcas]
10 Hb_000556_220 0.0770294199 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Jatropha curcas]
11 Hb_000680_110 0.0801028251 - - Endosomal P24A protein precursor, putative [Ricinus communis]
12 Hb_004410_050 0.0815490245 - - PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Jatropha curcas]
13 Hb_004019_120 0.0824727809 - - PREDICTED: conserved oligomeric Golgi complex subunit 1 [Jatropha curcas]
14 Hb_004531_120 0.0826483919 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
15 Hb_001188_020 0.087344336 - - PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X1 [Jatropha curcas]
16 Hb_000069_120 0.0891095999 - - PREDICTED: uncharacterized protein LOC105124742 isoform X1 [Populus euphratica]
17 Hb_003060_060 0.0891372924 - - PREDICTED: protein transport protein SEC31 homolog B [Jatropha curcas]
18 Hb_005656_040 0.089834759 desease resistance Gene Name: T2SE ATP-dependent RNA helicase, putative [Ricinus communis]
19 Hb_000094_310 0.0904701591 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
20 Hb_004182_050 0.0904806874 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000723_220 Hb_000723_220 Hb_000230_260 Hb_000230_260 Hb_000723_220--Hb_000230_260 Hb_006637_020 Hb_006637_020 Hb_000723_220--Hb_006637_020 Hb_017358_040 Hb_017358_040 Hb_000723_220--Hb_017358_040 Hb_001195_470 Hb_001195_470 Hb_000723_220--Hb_001195_470 Hb_085781_020 Hb_085781_020 Hb_000723_220--Hb_085781_020 Hb_071130_010 Hb_071130_010 Hb_000723_220--Hb_071130_010 Hb_000230_260--Hb_071130_010 Hb_000069_120 Hb_000069_120 Hb_000230_260--Hb_000069_120 Hb_041327_010 Hb_041327_010 Hb_000230_260--Hb_041327_010 Hb_003060_060 Hb_003060_060 Hb_000230_260--Hb_003060_060 Hb_000230_260--Hb_085781_020 Hb_000412_010 Hb_000412_010 Hb_000230_260--Hb_000412_010 Hb_002311_100 Hb_002311_100 Hb_006637_020--Hb_002311_100 Hb_000696_050 Hb_000696_050 Hb_006637_020--Hb_000696_050 Hb_006637_020--Hb_001195_470 Hb_004410_050 Hb_004410_050 Hb_006637_020--Hb_004410_050 Hb_000757_100 Hb_000757_100 Hb_006637_020--Hb_000757_100 Hb_017358_040--Hb_000069_120 Hb_001761_130 Hb_001761_130 Hb_017358_040--Hb_001761_130 Hb_017358_040--Hb_071130_010 Hb_017358_040--Hb_000230_260 Hb_017358_040--Hb_003060_060 Hb_004019_120 Hb_004019_120 Hb_001195_470--Hb_004019_120 Hb_000680_110 Hb_000680_110 Hb_001195_470--Hb_000680_110 Hb_003417_010 Hb_003417_010 Hb_001195_470--Hb_003417_010 Hb_001821_150 Hb_001821_150 Hb_001195_470--Hb_001821_150 Hb_004531_120 Hb_004531_120 Hb_001195_470--Hb_004531_120 Hb_085781_020--Hb_071130_010 Hb_000140_210 Hb_000140_210 Hb_085781_020--Hb_000140_210 Hb_000066_170 Hb_000066_170 Hb_085781_020--Hb_000066_170 Hb_085781_020--Hb_003060_060 Hb_002639_080 Hb_002639_080 Hb_085781_020--Hb_002639_080 Hb_071130_010--Hb_000069_120 Hb_071130_010--Hb_002639_080 Hb_001188_020 Hb_001188_020 Hb_071130_010--Hb_001188_020 Hb_071130_010--Hb_041327_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.7082 17.4759 4.40593 18.319 14.7004 18.6703
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.69365 6.68331 13.5562 18.365 15.3637

CAGE analysis