Hb_001821_150

Information

Type -
Description -
Location Contig1821: 179824-191595
Sequence    

Annotation

kegg
ID rcu:RCOM_0460570
description Potassium transporter, putative
nr
ID XP_012084585.1
description PREDICTED: potassium transporter 7-like [Jatropha curcas]
swissprot
ID Q9FY75
description Potassium transporter 7 OS=Arabidopsis thaliana GN=POT7 PE=1 SV=2
trembl
ID A0A067JX32
description Potassium transporter OS=Jatropha curcas GN=JCGZ_20172 PE=3 SV=1
Gene Ontology
ID GO:0016021
description potassium transporter 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17743: 179821-191254 , PASA_asmbl_17746: 183918-184048 , PASA_asmbl_17747: 191299-191409
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001821_150 0.0 - - PREDICTED: potassium transporter 7-like [Jatropha curcas]
2 Hb_000161_210 0.0700267706 - - PREDICTED: uncharacterized protein At5g49945-like [Jatropha curcas]
3 Hb_000130_180 0.0744616036 - - PREDICTED: GPI inositol-deacylase-like isoform X2 [Jatropha curcas]
4 Hb_002284_250 0.0745584634 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
5 Hb_003038_040 0.0747809281 transcription factor TF Family: TUB phosphoric diester hydrolase, putative [Ricinus communis]
6 Hb_007982_030 0.0748669155 - - PREDICTED: probable inactive receptor kinase At5g10020 isoform X1 [Jatropha curcas]
7 Hb_003417_010 0.076100052 - - PREDICTED: protein TPLATE [Jatropha curcas]
8 Hb_002675_030 0.0778870144 - - coatomer beta subunit, putative [Ricinus communis]
9 Hb_001552_030 0.0781803368 - - PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Jatropha curcas]
10 Hb_000264_350 0.0820985976 - - PREDICTED: uncharacterized protein LOC105649541 [Jatropha curcas]
11 Hb_001369_360 0.0828713446 - - embryo yellow protein, partial [Manihot esculenta]
12 Hb_000352_300 0.0828767262 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
13 Hb_004019_120 0.0831525163 - - PREDICTED: conserved oligomeric Golgi complex subunit 1 [Jatropha curcas]
14 Hb_003097_140 0.0836696615 - - PREDICTED: glycosyltransferase-like KOBITO 1 [Jatropha curcas]
15 Hb_001440_020 0.0839803728 - - exocyst componenet sec8, putative [Ricinus communis]
16 Hb_004531_120 0.0845127987 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
17 Hb_008511_020 0.0847862996 - - PREDICTED: coatomer subunit gamma-2 [Jatropha curcas]
18 Hb_001195_470 0.085101388 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
19 Hb_103684_010 0.0866606212 - - PREDICTED: cullin-1 isoform X3 [Nicotiana tomentosiformis]
20 Hb_000960_040 0.0885983371 - - PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Vitis vinifera]

Gene co-expression network

sample Hb_001821_150 Hb_001821_150 Hb_000161_210 Hb_000161_210 Hb_001821_150--Hb_000161_210 Hb_000130_180 Hb_000130_180 Hb_001821_150--Hb_000130_180 Hb_002284_250 Hb_002284_250 Hb_001821_150--Hb_002284_250 Hb_003038_040 Hb_003038_040 Hb_001821_150--Hb_003038_040 Hb_007982_030 Hb_007982_030 Hb_001821_150--Hb_007982_030 Hb_003417_010 Hb_003417_010 Hb_001821_150--Hb_003417_010 Hb_000161_210--Hb_003038_040 Hb_000161_210--Hb_007982_030 Hb_000352_300 Hb_000352_300 Hb_000161_210--Hb_000352_300 Hb_001703_050 Hb_001703_050 Hb_000161_210--Hb_001703_050 Hb_030982_010 Hb_030982_010 Hb_000161_210--Hb_030982_010 Hb_001258_110 Hb_001258_110 Hb_000130_180--Hb_001258_110 Hb_001014_210 Hb_001014_210 Hb_000130_180--Hb_001014_210 Hb_000140_350 Hb_000140_350 Hb_000130_180--Hb_000140_350 Hb_000130_180--Hb_002284_250 Hb_004531_120 Hb_004531_120 Hb_000130_180--Hb_004531_120 Hb_001437_190 Hb_001437_190 Hb_002284_250--Hb_001437_190 Hb_002284_250--Hb_001258_110 Hb_000062_020 Hb_000062_020 Hb_002284_250--Hb_000062_020 Hb_003912_070 Hb_003912_070 Hb_002284_250--Hb_003912_070 Hb_002284_250--Hb_004531_120 Hb_003994_220 Hb_003994_220 Hb_003038_040--Hb_003994_220 Hb_001097_040 Hb_001097_040 Hb_003038_040--Hb_001097_040 Hb_065500_020 Hb_065500_020 Hb_003038_040--Hb_065500_020 Hb_001159_030 Hb_001159_030 Hb_003038_040--Hb_001159_030 Hb_010042_030 Hb_010042_030 Hb_003038_040--Hb_010042_030 Hb_001789_030 Hb_001789_030 Hb_007982_030--Hb_001789_030 Hb_002675_030 Hb_002675_030 Hb_007982_030--Hb_002675_030 Hb_001552_030 Hb_001552_030 Hb_007982_030--Hb_001552_030 Hb_000579_240 Hb_000579_240 Hb_007982_030--Hb_000579_240 Hb_000183_050 Hb_000183_050 Hb_003417_010--Hb_000183_050 Hb_000284_230 Hb_000284_230 Hb_003417_010--Hb_000284_230 Hb_000066_150 Hb_000066_150 Hb_003417_010--Hb_000066_150 Hb_000494_050 Hb_000494_050 Hb_003417_010--Hb_000494_050 Hb_001195_470 Hb_001195_470 Hb_003417_010--Hb_001195_470
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.81169 10.018 8.33587 18.9131 10.3652 11.5513
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.97047 4.09626 9.04815 15.4606 11.2564

CAGE analysis