Hb_004531_120

Information

Type -
Description -
Location Contig4531: 76122-80660
Sequence    

Annotation

kegg
ID rcu:RCOM_1492630
description hypothetical protein
nr
ID XP_012073399.1
description PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KM20
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06322 PE=4 SV=1
Gene Ontology
ID GO:0005739
description PREDICTED: uncharacterized protein LOC105635025

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43314: 77468-80199
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004531_120 0.0 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
2 Hb_000680_110 0.0600622661 - - Endosomal P24A protein precursor, putative [Ricinus communis]
3 Hb_000139_130 0.0745671635 - - PREDICTED: chloride channel protein CLC-d isoform X1 [Jatropha curcas]
4 Hb_004109_230 0.0779304685 - - heat shock protein binding protein, putative [Ricinus communis]
5 Hb_000062_020 0.0784255892 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_002284_250 0.0803799123 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
7 Hb_000130_180 0.0812666315 - - PREDICTED: GPI inositol-deacylase-like isoform X2 [Jatropha curcas]
8 Hb_000230_260 0.0822909162 - - PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Jatropha curcas]
9 Hb_000723_220 0.0826483919 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
10 Hb_031527_030 0.0841193326 - - PREDICTED: ribosomal RNA processing protein 1 homolog [Jatropha curcas]
11 Hb_001821_150 0.0845127987 - - PREDICTED: potassium transporter 7-like [Jatropha curcas]
12 Hb_001195_470 0.085201635 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
13 Hb_001258_110 0.0858946591 - - transporter, putative [Ricinus communis]
14 Hb_006355_090 0.087142009 desease resistance Gene Name: AAA PREDICTED: 26S proteasome regulatory subunit 4 homolog A [Jatropha curcas]
15 Hb_000667_030 0.0871645619 - - PREDICTED: protein transport protein SEC23-like [Jatropha curcas]
16 Hb_004410_120 0.0876234691 - - PREDICTED: uncharacterized protein LOC105633877 isoform X1 [Jatropha curcas]
17 Hb_000048_060 0.0894414259 - - PREDICTED: probable apyrase 7 isoform X1 [Jatropha curcas]
18 Hb_000696_050 0.0922029897 - - PREDICTED: CSC1-like protein At4g35870 [Jatropha curcas]
19 Hb_061878_010 0.0927320963 - - hypothetical protein CISIN_1g0094072mg, partial [Citrus sinensis]
20 Hb_000009_500 0.0928932461 - - PREDICTED: NASP-related protein sim3 [Jatropha curcas]

Gene co-expression network

sample Hb_004531_120 Hb_004531_120 Hb_000680_110 Hb_000680_110 Hb_004531_120--Hb_000680_110 Hb_000139_130 Hb_000139_130 Hb_004531_120--Hb_000139_130 Hb_004109_230 Hb_004109_230 Hb_004531_120--Hb_004109_230 Hb_000062_020 Hb_000062_020 Hb_004531_120--Hb_000062_020 Hb_002284_250 Hb_002284_250 Hb_004531_120--Hb_002284_250 Hb_000130_180 Hb_000130_180 Hb_004531_120--Hb_000130_180 Hb_001195_470 Hb_001195_470 Hb_000680_110--Hb_001195_470 Hb_000723_220 Hb_000723_220 Hb_000680_110--Hb_000723_220 Hb_000264_350 Hb_000264_350 Hb_000680_110--Hb_000264_350 Hb_000230_260 Hb_000230_260 Hb_000680_110--Hb_000230_260 Hb_002902_080 Hb_002902_080 Hb_000680_110--Hb_002902_080 Hb_001033_050 Hb_001033_050 Hb_000139_130--Hb_001033_050 Hb_000139_130--Hb_004109_230 Hb_004668_060 Hb_004668_060 Hb_000139_130--Hb_004668_060 Hb_001377_160 Hb_001377_160 Hb_000139_130--Hb_001377_160 Hb_061878_010 Hb_061878_010 Hb_000139_130--Hb_061878_010 Hb_004109_370 Hb_004109_370 Hb_000139_130--Hb_004109_370 Hb_000009_500 Hb_000009_500 Hb_004109_230--Hb_000009_500 Hb_028512_020 Hb_028512_020 Hb_004109_230--Hb_028512_020 Hb_003943_010 Hb_003943_010 Hb_004109_230--Hb_003943_010 Hb_014361_070 Hb_014361_070 Hb_004109_230--Hb_014361_070 Hb_011849_040 Hb_011849_040 Hb_004109_230--Hb_011849_040 Hb_001442_060 Hb_001442_060 Hb_000062_020--Hb_001442_060 Hb_000062_020--Hb_002284_250 Hb_000062_020--Hb_004109_230 Hb_001109_060 Hb_001109_060 Hb_000062_020--Hb_001109_060 Hb_012760_100 Hb_012760_100 Hb_000062_020--Hb_012760_100 Hb_001437_190 Hb_001437_190 Hb_002284_250--Hb_001437_190 Hb_001258_110 Hb_001258_110 Hb_002284_250--Hb_001258_110 Hb_001821_150 Hb_001821_150 Hb_002284_250--Hb_001821_150 Hb_003912_070 Hb_003912_070 Hb_002284_250--Hb_003912_070 Hb_000130_180--Hb_001258_110 Hb_000130_180--Hb_001821_150 Hb_001014_210 Hb_001014_210 Hb_000130_180--Hb_001014_210 Hb_000140_350 Hb_000140_350 Hb_000130_180--Hb_000140_350 Hb_000130_180--Hb_002284_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.57641 7.82158 3.68655 10.7936 7.48134 7.96577
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.14535 3.61163 5.29397 7.68905 5.52215

CAGE analysis