Hb_000264_350

Information

Type -
Description -
Location Contig264: 326018-328894
Sequence    

Annotation

kegg
ID rcu:RCOM_0936630
description hypothetical protein
nr
ID XP_012091603.1
description PREDICTED: uncharacterized protein LOC105649541 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JAY3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21442 PE=4 SV=1
Gene Ontology
ID GO:0005794
description duf2921 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27635: 329667-331325
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000264_350 0.0 - - PREDICTED: uncharacterized protein LOC105649541 [Jatropha curcas]
2 Hb_000004_030 0.0619958211 - - PREDICTED: Niemann-Pick C1 protein [Jatropha curcas]
3 Hb_000960_040 0.0664342325 - - PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Vitis vinifera]
4 Hb_000579_240 0.0753561333 - - phosphatidylinositol transporter, putative [Ricinus communis]
5 Hb_002675_030 0.0801487287 - - coatomer beta subunit, putative [Ricinus communis]
6 Hb_000183_050 0.0813896663 - - PREDICTED: alpha-mannosidase 2 [Jatropha curcas]
7 Hb_001821_150 0.0820985976 - - PREDICTED: potassium transporter 7-like [Jatropha curcas]
8 Hb_010294_010 0.0827959279 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Jatropha curcas]
9 Hb_000667_030 0.0834896715 - - PREDICTED: protein transport protein SEC23-like [Jatropha curcas]
10 Hb_000680_110 0.0856188507 - - Endosomal P24A protein precursor, putative [Ricinus communis]
11 Hb_001195_470 0.086313693 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
12 Hb_000284_120 0.09082002 - - PREDICTED: uncharacterized protein LOC105629656 [Jatropha curcas]
13 Hb_003417_010 0.0911253191 - - PREDICTED: protein TPLATE [Jatropha curcas]
14 Hb_004659_020 0.0924437934 - - PREDICTED: coatomer subunit gamma-2 [Jatropha curcas]
15 Hb_000086_440 0.0928233617 - - PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Jatropha curcas]
16 Hb_000031_110 0.093527054 - - Coatomer, beta subunit isoform 1 [Theobroma cacao]
17 Hb_001655_030 0.094366231 transcription factor TF Family: SNF2 PREDICTED: SNF2 domain-containing protein CLASSY 3 isoform X2 [Jatropha curcas]
18 Hb_000556_220 0.0946389696 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Jatropha curcas]
19 Hb_008511_020 0.0956158225 - - PREDICTED: coatomer subunit gamma-2 [Jatropha curcas]
20 Hb_002391_290 0.0962379132 - - PREDICTED: bifunctional nuclease 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000264_350 Hb_000264_350 Hb_000004_030 Hb_000004_030 Hb_000264_350--Hb_000004_030 Hb_000960_040 Hb_000960_040 Hb_000264_350--Hb_000960_040 Hb_000579_240 Hb_000579_240 Hb_000264_350--Hb_000579_240 Hb_002675_030 Hb_002675_030 Hb_000264_350--Hb_002675_030 Hb_000183_050 Hb_000183_050 Hb_000264_350--Hb_000183_050 Hb_001821_150 Hb_001821_150 Hb_000264_350--Hb_001821_150 Hb_000004_030--Hb_000960_040 Hb_041828_010 Hb_041828_010 Hb_000004_030--Hb_041828_010 Hb_002391_290 Hb_002391_290 Hb_000004_030--Hb_002391_290 Hb_004659_020 Hb_004659_020 Hb_000004_030--Hb_004659_020 Hb_001862_140 Hb_001862_140 Hb_000004_030--Hb_001862_140 Hb_008511_020 Hb_008511_020 Hb_000960_040--Hb_008511_020 Hb_000667_030 Hb_000667_030 Hb_000960_040--Hb_000667_030 Hb_000960_040--Hb_002675_030 Hb_010294_010 Hb_010294_010 Hb_000960_040--Hb_010294_010 Hb_000579_240--Hb_002675_030 Hb_000579_240--Hb_010294_010 Hb_005227_010 Hb_005227_010 Hb_000579_240--Hb_005227_010 Hb_007982_030 Hb_007982_030 Hb_000579_240--Hb_007982_030 Hb_000579_240--Hb_008511_020 Hb_002675_030--Hb_008511_020 Hb_001440_020 Hb_001440_020 Hb_002675_030--Hb_001440_020 Hb_002675_030--Hb_001821_150 Hb_015978_100 Hb_015978_100 Hb_000183_050--Hb_015978_100 Hb_000086_690 Hb_000086_690 Hb_000183_050--Hb_000086_690 Hb_011202_020 Hb_011202_020 Hb_000183_050--Hb_011202_020 Hb_003417_010 Hb_003417_010 Hb_000183_050--Hb_003417_010 Hb_001235_230 Hb_001235_230 Hb_000183_050--Hb_001235_230 Hb_000035_410 Hb_000035_410 Hb_000183_050--Hb_000035_410 Hb_000161_210 Hb_000161_210 Hb_001821_150--Hb_000161_210 Hb_000130_180 Hb_000130_180 Hb_001821_150--Hb_000130_180 Hb_002284_250 Hb_002284_250 Hb_001821_150--Hb_002284_250 Hb_003038_040 Hb_003038_040 Hb_001821_150--Hb_003038_040 Hb_001821_150--Hb_007982_030 Hb_001821_150--Hb_003417_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.91197 7.83588 6.90849 13.7821 13.2803 12.572
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.37267 3.34535 8.51864 12.7648 12.9902

CAGE analysis