Hb_007982_030

Information

Type -
Description -
Location Contig7982: 17947-25095
Sequence    

Annotation

kegg
ID rcu:RCOM_0193290
description receptor protein kinase, putative (EC:3.1.3.16)
nr
ID XP_012075199.1
description PREDICTED: probable inactive receptor kinase At5g10020 isoform X1 [Jatropha curcas]
swissprot
ID Q0WR59
description Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2
trembl
ID A0A067KSK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09384 PE=4 SV=1
Gene Ontology
ID GO:0005829
description probable inactive receptor kinase at5g10020

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58604: 17902-22511 , PASA_asmbl_58606: 22586-24993
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007982_030 0.0 - - PREDICTED: probable inactive receptor kinase At5g10020 isoform X1 [Jatropha curcas]
2 Hb_000161_210 0.0682761628 - - PREDICTED: uncharacterized protein At5g49945-like [Jatropha curcas]
3 Hb_001821_150 0.0748669155 - - PREDICTED: potassium transporter 7-like [Jatropha curcas]
4 Hb_001789_030 0.0834508228 - - PREDICTED: signal peptide peptidase-like 1 [Jatropha curcas]
5 Hb_002675_030 0.0835100372 - - coatomer beta subunit, putative [Ricinus communis]
6 Hb_001552_030 0.0892074189 - - PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Jatropha curcas]
7 Hb_000579_240 0.0896541033 - - phosphatidylinositol transporter, putative [Ricinus communis]
8 Hb_003417_010 0.0906106223 - - PREDICTED: protein TPLATE [Jatropha curcas]
9 Hb_010294_010 0.0911721836 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Jatropha curcas]
10 Hb_000667_030 0.0920285397 - - PREDICTED: protein transport protein SEC23-like [Jatropha curcas]
11 Hb_121089_030 0.0923710775 - - PREDICTED: dynamin-related protein 5A [Jatropha curcas]
12 Hb_002473_050 0.0924409182 - - catalytic, putative [Ricinus communis]
13 Hb_000352_300 0.0929620804 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
14 Hb_000123_180 0.0932284567 - - 2-oxoglutarate dehydrogenase, putative [Ricinus communis]
15 Hb_012518_070 0.093393345 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 isoform X1 [Jatropha curcas]
16 Hb_007894_160 0.0950126352 - - PREDICTED: purple acid phosphatase 18 [Jatropha curcas]
17 Hb_002784_030 0.0958667224 - - hypothetical protein POPTR_0001s06740g [Populus trichocarpa]
18 Hb_008511_020 0.0959575727 - - PREDICTED: coatomer subunit gamma-2 [Jatropha curcas]
19 Hb_000494_050 0.0960160676 - - cationic amino acid transporter, putative [Ricinus communis]
20 Hb_002475_040 0.0965455601 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_007982_030 Hb_007982_030 Hb_000161_210 Hb_000161_210 Hb_007982_030--Hb_000161_210 Hb_001821_150 Hb_001821_150 Hb_007982_030--Hb_001821_150 Hb_001789_030 Hb_001789_030 Hb_007982_030--Hb_001789_030 Hb_002675_030 Hb_002675_030 Hb_007982_030--Hb_002675_030 Hb_001552_030 Hb_001552_030 Hb_007982_030--Hb_001552_030 Hb_000579_240 Hb_000579_240 Hb_007982_030--Hb_000579_240 Hb_003038_040 Hb_003038_040 Hb_000161_210--Hb_003038_040 Hb_000161_210--Hb_001821_150 Hb_000352_300 Hb_000352_300 Hb_000161_210--Hb_000352_300 Hb_001703_050 Hb_001703_050 Hb_000161_210--Hb_001703_050 Hb_030982_010 Hb_030982_010 Hb_000161_210--Hb_030982_010 Hb_000130_180 Hb_000130_180 Hb_001821_150--Hb_000130_180 Hb_002284_250 Hb_002284_250 Hb_001821_150--Hb_002284_250 Hb_001821_150--Hb_003038_040 Hb_003417_010 Hb_003417_010 Hb_001821_150--Hb_003417_010 Hb_000163_090 Hb_000163_090 Hb_001789_030--Hb_000163_090 Hb_001789_030--Hb_000352_300 Hb_000184_070 Hb_000184_070 Hb_001789_030--Hb_000184_070 Hb_000637_150 Hb_000637_150 Hb_001789_030--Hb_000637_150 Hb_001584_140 Hb_001584_140 Hb_001789_030--Hb_001584_140 Hb_001009_320 Hb_001009_320 Hb_001789_030--Hb_001009_320 Hb_008511_020 Hb_008511_020 Hb_002675_030--Hb_008511_020 Hb_001440_020 Hb_001440_020 Hb_002675_030--Hb_001440_020 Hb_002675_030--Hb_000579_240 Hb_000960_040 Hb_000960_040 Hb_002675_030--Hb_000960_040 Hb_002675_030--Hb_001821_150 Hb_000264_350 Hb_000264_350 Hb_002675_030--Hb_000264_350 Hb_000017_230 Hb_000017_230 Hb_001552_030--Hb_000017_230 Hb_001488_220 Hb_001488_220 Hb_001552_030--Hb_001488_220 Hb_001085_290 Hb_001085_290 Hb_001552_030--Hb_001085_290 Hb_004109_370 Hb_004109_370 Hb_001552_030--Hb_004109_370 Hb_002784_030 Hb_002784_030 Hb_001552_030--Hb_002784_030 Hb_121089_030 Hb_121089_030 Hb_001552_030--Hb_121089_030 Hb_000579_240--Hb_000264_350 Hb_010294_010 Hb_010294_010 Hb_000579_240--Hb_010294_010 Hb_005227_010 Hb_005227_010 Hb_000579_240--Hb_005227_010 Hb_000579_240--Hb_008511_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.74382 5.46072 5.34532 9.74549 6.88812 4.23874
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.10816 2.27863 4.71222 6.97166 5.89786

CAGE analysis