Hb_002902_080

Information

Type -
Description -
Location Contig2902: 59914-61017
Sequence    

Annotation

kegg
ID rcu:RCOM_0333480
description hypothetical protein
nr
ID XP_012079371.1
description PREDICTED: uncharacterized protein LOC105639821 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KIF0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12511 PE=4 SV=1
Gene Ontology
ID GO:0016020
description nhl domain-containing protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30428: 60076-61130
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002902_080 0.0 - - PREDICTED: uncharacterized protein LOC105639821 [Jatropha curcas]
2 Hb_000680_110 0.0862355961 - - Endosomal P24A protein precursor, putative [Ricinus communis]
3 Hb_000130_180 0.103250782 - - PREDICTED: GPI inositol-deacylase-like isoform X2 [Jatropha curcas]
4 Hb_004531_120 0.1179388349 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
5 Hb_150346_010 0.1187983742 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
6 Hb_004306_040 0.1201972721 - - PREDICTED: probable methionine--tRNA ligase [Jatropha curcas]
7 Hb_027136_010 0.1212651672 - - hypothetical protein L484_010426 [Morus notabilis]
8 Hb_001195_470 0.123296915 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
9 Hb_003417_010 0.1256191484 - - PREDICTED: protein TPLATE [Jatropha curcas]
10 Hb_000264_350 0.1261766538 - - PREDICTED: uncharacterized protein LOC105649541 [Jatropha curcas]
11 Hb_001821_150 0.1276923903 - - PREDICTED: potassium transporter 7-like [Jatropha curcas]
12 Hb_178968_050 0.1327209603 - - PREDICTED: probable serine incorporator [Jatropha curcas]
13 Hb_031931_020 0.1339410195 - - Minor histocompatibility antigen H13, putative [Ricinus communis]
14 Hb_000365_330 0.1347721898 - - zinc finger protein, putative [Ricinus communis]
15 Hb_002284_250 0.1348109474 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
16 Hb_007982_030 0.1358262073 - - PREDICTED: probable inactive receptor kinase At5g10020 isoform X1 [Jatropha curcas]
17 Hb_000284_230 0.1363088311 - - PREDICTED: uncharacterized protein At5g49945-like [Jatropha curcas]
18 Hb_002044_170 0.1368076671 - - hypothetical protein POPTR_0014s17160g [Populus trichocarpa]
19 Hb_000345_360 0.1369654841 - - PREDICTED: protein AUXIN RESPONSE 4 [Jatropha curcas]
20 Hb_001366_210 0.1377660697 - - cathepsin B, putative [Ricinus communis]

Gene co-expression network

sample Hb_002902_080 Hb_002902_080 Hb_000680_110 Hb_000680_110 Hb_002902_080--Hb_000680_110 Hb_000130_180 Hb_000130_180 Hb_002902_080--Hb_000130_180 Hb_004531_120 Hb_004531_120 Hb_002902_080--Hb_004531_120 Hb_150346_010 Hb_150346_010 Hb_002902_080--Hb_150346_010 Hb_004306_040 Hb_004306_040 Hb_002902_080--Hb_004306_040 Hb_027136_010 Hb_027136_010 Hb_002902_080--Hb_027136_010 Hb_000680_110--Hb_004531_120 Hb_001195_470 Hb_001195_470 Hb_000680_110--Hb_001195_470 Hb_000723_220 Hb_000723_220 Hb_000680_110--Hb_000723_220 Hb_000264_350 Hb_000264_350 Hb_000680_110--Hb_000264_350 Hb_000230_260 Hb_000230_260 Hb_000680_110--Hb_000230_260 Hb_001258_110 Hb_001258_110 Hb_000130_180--Hb_001258_110 Hb_001821_150 Hb_001821_150 Hb_000130_180--Hb_001821_150 Hb_001014_210 Hb_001014_210 Hb_000130_180--Hb_001014_210 Hb_000140_350 Hb_000140_350 Hb_000130_180--Hb_000140_350 Hb_002284_250 Hb_002284_250 Hb_000130_180--Hb_002284_250 Hb_000130_180--Hb_004531_120 Hb_000139_130 Hb_000139_130 Hb_004531_120--Hb_000139_130 Hb_004109_230 Hb_004109_230 Hb_004531_120--Hb_004109_230 Hb_000062_020 Hb_000062_020 Hb_004531_120--Hb_000062_020 Hb_004531_120--Hb_002284_250 Hb_000260_780 Hb_000260_780 Hb_150346_010--Hb_000260_780 Hb_150346_010--Hb_027136_010 Hb_000284_230 Hb_000284_230 Hb_150346_010--Hb_000284_230 Hb_178968_050 Hb_178968_050 Hb_150346_010--Hb_178968_050 Hb_000205_280 Hb_000205_280 Hb_150346_010--Hb_000205_280 Hb_000580_050 Hb_000580_050 Hb_150346_010--Hb_000580_050 Hb_009851_050 Hb_009851_050 Hb_004306_040--Hb_009851_050 Hb_028707_080 Hb_028707_080 Hb_004306_040--Hb_028707_080 Hb_000058_110 Hb_000058_110 Hb_004306_040--Hb_000058_110 Hb_000365_330 Hb_000365_330 Hb_004306_040--Hb_000365_330 Hb_000008_270 Hb_000008_270 Hb_004306_040--Hb_000008_270 Hb_000635_200 Hb_000635_200 Hb_027136_010--Hb_000635_200 Hb_002375_110 Hb_002375_110 Hb_027136_010--Hb_002375_110 Hb_027136_010--Hb_178968_050 Hb_004040_040 Hb_004040_040 Hb_027136_010--Hb_004040_040 Hb_027136_010--Hb_000260_780
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.69626 17.1126 6.34189 31.4537 26.6905 17.7083
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.30703 5.08164 9.54127 19.5546 15.5521

CAGE analysis