Hb_004109_230

Information

Type -
Description -
Location Contig4109: 229837-238593
Sequence    

Annotation

kegg
ID rcu:RCOM_0564980
description heat shock protein binding protein, putative
nr
ID XP_002529949.1
description heat shock protein binding protein, putative [Ricinus communis]
swissprot
ID Q921R4
description DnaJ homolog subfamily C member 14 OS=Mus musculus GN=Dnajc14 PE=2 SV=2
trembl
ID B9SVD0
description Heat shock protein binding protein, putative OS=Ricinus communis GN=RCOM_0564980 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40657: 229831-238988 , PASA_asmbl_40659: 237568-237889 , PASA_asmbl_40661: 236959-237441
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004109_230 0.0 - - heat shock protein binding protein, putative [Ricinus communis]
2 Hb_000009_500 0.0592556462 - - PREDICTED: NASP-related protein sim3 [Jatropha curcas]
3 Hb_000139_130 0.0620042678 - - PREDICTED: chloride channel protein CLC-d isoform X1 [Jatropha curcas]
4 Hb_028512_020 0.0637829578 - - PREDICTED: protein S-acyltransferase 11 isoform X2 [Jatropha curcas]
5 Hb_003943_010 0.0680602664 - - conserved hypothetical protein [Ricinus communis]
6 Hb_014361_070 0.0692249216 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
7 Hb_011849_040 0.0692436567 - - ubiquitin-protein ligase, putative [Ricinus communis]
8 Hb_008253_020 0.0698335666 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
9 Hb_000170_090 0.0720720924 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
10 Hb_002026_210 0.0724023752 - - PREDICTED: probable serine/threonine-protein kinase At5g41260 [Jatropha curcas]
11 Hb_004128_130 0.0726550455 - - PREDICTED: protein MODIFIER OF SNC1 11 isoform X1 [Jatropha curcas]
12 Hb_005460_050 0.0735701332 - - COR413-PM2, putative [Ricinus communis]
13 Hb_001377_160 0.0742906701 - - PREDICTED: protein SDE2 homolog [Jatropha curcas]
14 Hb_001635_160 0.0759827961 - - hypothetical protein JCGZ_24810 [Jatropha curcas]
15 Hb_007508_080 0.0765542858 - - PREDICTED: presenilin-like protein At2g29900 [Jatropha curcas]
16 Hb_000009_400 0.0769708993 - - PREDICTED: BTB/POZ domain-containing protein At3g50780 [Jatropha curcas]
17 Hb_004129_070 0.0778233567 - - PREDICTED: conserved oligomeric Golgi complex subunit 5 [Jatropha curcas]
18 Hb_000062_020 0.0778819602 - - ubiquitin-protein ligase, putative [Ricinus communis]
19 Hb_004531_120 0.0779304685 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
20 Hb_000046_570 0.0781915687 - - hypothetical protein JCGZ_01998 [Jatropha curcas]

Gene co-expression network

sample Hb_004109_230 Hb_004109_230 Hb_000009_500 Hb_000009_500 Hb_004109_230--Hb_000009_500 Hb_000139_130 Hb_000139_130 Hb_004109_230--Hb_000139_130 Hb_028512_020 Hb_028512_020 Hb_004109_230--Hb_028512_020 Hb_003943_010 Hb_003943_010 Hb_004109_230--Hb_003943_010 Hb_014361_070 Hb_014361_070 Hb_004109_230--Hb_014361_070 Hb_011849_040 Hb_011849_040 Hb_004109_230--Hb_011849_040 Hb_000009_500--Hb_011849_040 Hb_000402_230 Hb_000402_230 Hb_000009_500--Hb_000402_230 Hb_079326_020 Hb_079326_020 Hb_000009_500--Hb_079326_020 Hb_002026_210 Hb_002026_210 Hb_000009_500--Hb_002026_210 Hb_000614_210 Hb_000614_210 Hb_000009_500--Hb_000614_210 Hb_001033_050 Hb_001033_050 Hb_000139_130--Hb_001033_050 Hb_004668_060 Hb_004668_060 Hb_000139_130--Hb_004668_060 Hb_001377_160 Hb_001377_160 Hb_000139_130--Hb_001377_160 Hb_061878_010 Hb_061878_010 Hb_000139_130--Hb_061878_010 Hb_004109_370 Hb_004109_370 Hb_000139_130--Hb_004109_370 Hb_028512_020--Hb_002026_210 Hb_000260_330 Hb_000260_330 Hb_028512_020--Hb_000260_330 Hb_001860_030 Hb_001860_030 Hb_028512_020--Hb_001860_030 Hb_000923_010 Hb_000923_010 Hb_028512_020--Hb_000923_010 Hb_028512_020--Hb_014361_070 Hb_003943_010--Hb_001377_160 Hb_001946_340 Hb_001946_340 Hb_003943_010--Hb_001946_340 Hb_000227_220 Hb_000227_220 Hb_003943_010--Hb_000227_220 Hb_000398_080 Hb_000398_080 Hb_003943_010--Hb_000398_080 Hb_000879_040 Hb_000879_040 Hb_003943_010--Hb_000879_040 Hb_159558_010 Hb_159558_010 Hb_003943_010--Hb_159558_010 Hb_000975_040 Hb_000975_040 Hb_014361_070--Hb_000975_040 Hb_003371_110 Hb_003371_110 Hb_014361_070--Hb_003371_110 Hb_007576_110 Hb_007576_110 Hb_014361_070--Hb_007576_110 Hb_000289_040 Hb_000289_040 Hb_014361_070--Hb_000289_040 Hb_002823_030 Hb_002823_030 Hb_014361_070--Hb_002823_030 Hb_001195_320 Hb_001195_320 Hb_014361_070--Hb_001195_320 Hb_011849_040--Hb_079326_020 Hb_011849_040--Hb_000402_230 Hb_011849_040--Hb_002026_210 Hb_004143_100 Hb_004143_100 Hb_011849_040--Hb_004143_100 Hb_011849_040--Hb_000614_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.95196 13.1088 8.35892 15.9708 12.2785 12.2262
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.48845 7.21945 6.74316 10.5661 9.87351

CAGE analysis