Hb_028512_020

Information

Type -
Description -
Location Contig28512: 11115-17020
Sequence    

Annotation

kegg
ID pop:POPTR_0007s07860g
description POPTRDRAFT_562831; hypothetical protein
nr
ID XP_012065795.1
description PREDICTED: protein S-acyltransferase 11 isoform X2 [Jatropha curcas]
swissprot
ID Q9LIH7
description Protein S-acyltransferase 11 OS=Arabidopsis thaliana GN=PAT11 PE=2 SV=1
trembl
ID A0A067LFL4
description S-acyltransferase OS=Jatropha curcas GN=JCGZ_24201 PE=3 SV=1
Gene Ontology
ID GO:0016021
description protein s-acyltransferase 11-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29863: 10745-20236 , PASA_asmbl_29864: 16459-16677
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_028512_020 0.0 - - PREDICTED: protein S-acyltransferase 11 isoform X2 [Jatropha curcas]
2 Hb_002026_210 0.0560358035 - - PREDICTED: probable serine/threonine-protein kinase At5g41260 [Jatropha curcas]
3 Hb_000260_330 0.0565397901 - - PREDICTED: uncharacterized protein LOC103438625 [Malus domestica]
4 Hb_004109_230 0.0637829578 - - heat shock protein binding protein, putative [Ricinus communis]
5 Hb_001860_030 0.0638842078 - - PREDICTED: cleavage stimulation factor subunit 77 isoform X5 [Jatropha curcas]
6 Hb_000923_010 0.0655708541 - - PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X1 [Jatropha curcas]
7 Hb_014361_070 0.0687077299 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
8 Hb_000170_090 0.0689531387 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
9 Hb_105328_020 0.069121571 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]
10 Hb_003683_020 0.0692731492 - - serine/threonine protein kinase, putative [Ricinus communis]
11 Hb_001635_090 0.0695256372 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 7 isoform X1 [Populus euphratica]
12 Hb_001635_160 0.0709183973 - - hypothetical protein JCGZ_24810 [Jatropha curcas]
13 Hb_013738_020 0.0713532617 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
14 Hb_002811_180 0.0716822221 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002374_370 0.0745118626 - - protein with unknown function [Ricinus communis]
16 Hb_000976_140 0.0746241471 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
17 Hb_013399_020 0.0747255771 - - PREDICTED: developmentally-regulated G-protein 2 [Jatropha curcas]
18 Hb_001922_150 0.0750308136 - - PREDICTED: WD repeat-containing protein 91 homolog isoform X1 [Jatropha curcas]
19 Hb_007576_110 0.0754356008 - - Endoplasmic reticulum vesicle transporter protein [Theobroma cacao]
20 Hb_011037_030 0.0759806723 - - PREDICTED: uncharacterized protein LOC105641407 [Jatropha curcas]

Gene co-expression network

sample Hb_028512_020 Hb_028512_020 Hb_002026_210 Hb_002026_210 Hb_028512_020--Hb_002026_210 Hb_000260_330 Hb_000260_330 Hb_028512_020--Hb_000260_330 Hb_004109_230 Hb_004109_230 Hb_028512_020--Hb_004109_230 Hb_001860_030 Hb_001860_030 Hb_028512_020--Hb_001860_030 Hb_000923_010 Hb_000923_010 Hb_028512_020--Hb_000923_010 Hb_014361_070 Hb_014361_070 Hb_028512_020--Hb_014361_070 Hb_011849_040 Hb_011849_040 Hb_002026_210--Hb_011849_040 Hb_000009_500 Hb_000009_500 Hb_002026_210--Hb_000009_500 Hb_000614_210 Hb_000614_210 Hb_002026_210--Hb_000614_210 Hb_002026_210--Hb_000923_010 Hb_000340_530 Hb_000340_530 Hb_002026_210--Hb_000340_530 Hb_000025_180 Hb_000025_180 Hb_000260_330--Hb_000025_180 Hb_000345_240 Hb_000345_240 Hb_000260_330--Hb_000345_240 Hb_002811_180 Hb_002811_180 Hb_000260_330--Hb_002811_180 Hb_003683_020 Hb_003683_020 Hb_000260_330--Hb_003683_020 Hb_000260_330--Hb_000923_010 Hb_004109_230--Hb_000009_500 Hb_000139_130 Hb_000139_130 Hb_004109_230--Hb_000139_130 Hb_003943_010 Hb_003943_010 Hb_004109_230--Hb_003943_010 Hb_004109_230--Hb_014361_070 Hb_004109_230--Hb_011849_040 Hb_000062_270 Hb_000062_270 Hb_001860_030--Hb_000062_270 Hb_013399_020 Hb_013399_020 Hb_001860_030--Hb_013399_020 Hb_000981_030 Hb_000981_030 Hb_001860_030--Hb_000981_030 Hb_004324_130 Hb_004324_130 Hb_001860_030--Hb_004324_130 Hb_001635_090 Hb_001635_090 Hb_001860_030--Hb_001635_090 Hb_000923_010--Hb_013399_020 Hb_000029_300 Hb_000029_300 Hb_000923_010--Hb_000029_300 Hb_000083_120 Hb_000083_120 Hb_000923_010--Hb_000083_120 Hb_000923_010--Hb_000340_530 Hb_000975_040 Hb_000975_040 Hb_014361_070--Hb_000975_040 Hb_003371_110 Hb_003371_110 Hb_014361_070--Hb_003371_110 Hb_007576_110 Hb_007576_110 Hb_014361_070--Hb_007576_110 Hb_000289_040 Hb_000289_040 Hb_014361_070--Hb_000289_040 Hb_002823_030 Hb_002823_030 Hb_014361_070--Hb_002823_030 Hb_001195_320 Hb_001195_320 Hb_014361_070--Hb_001195_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.87716 3.26851 2.38165 4.35975 3.44073 4.26426
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.1715 3.10846 2.12327 3.46986 2.75368

CAGE analysis