Hb_006637_020

Information

Type -
Description -
Location Contig6637: 9261-15632
Sequence    

Annotation

kegg
ID rcu:RCOM_1355450
description hypothetical protein
nr
ID XP_012082377.1
description PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KBE0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16523 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53121: 12206-13621
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006637_020 0.0 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
2 Hb_000723_220 0.0680412754 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
3 Hb_002311_100 0.0923179416 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 11-like [Jatropha curcas]
4 Hb_000696_050 0.0942143419 - - PREDICTED: CSC1-like protein At4g35870 [Jatropha curcas]
5 Hb_001195_470 0.0948856934 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
6 Hb_004410_050 0.0977444491 - - PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Jatropha curcas]
7 Hb_000757_100 0.0980923799 - - SPla/RYanodine receptor domain-containing protein isoform 2 [Theobroma cacao]
8 Hb_000453_250 0.1011571874 - - PREDICTED: uncharacterized protein LOC105637185 [Jatropha curcas]
9 Hb_024074_040 0.1018975696 - - PREDICTED: leucine--tRNA ligase, cytoplasmic [Jatropha curcas]
10 Hb_000062_020 0.1046111173 - - ubiquitin-protein ligase, putative [Ricinus communis]
11 Hb_002400_460 0.1063658395 - - PREDICTED: uncharacterized protein LOC105637599 isoform X2 [Jatropha curcas]
12 Hb_009898_010 0.1073947135 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105645502 [Jatropha curcas]
13 Hb_008494_010 0.1074769381 - - PREDICTED: uncharacterized protein LOC105636015 [Jatropha curcas]
14 Hb_004531_120 0.109123602 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
15 Hb_025194_040 0.1093324168 - - PREDICTED: uncharacterized protein LOC105644854 isoform X2 [Jatropha curcas]
16 Hb_001188_020 0.109682258 - - PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X1 [Jatropha curcas]
17 Hb_000260_070 0.1104787495 - - kinase, putative [Ricinus communis]
18 Hb_004019_120 0.1120627442 - - PREDICTED: conserved oligomeric Golgi complex subunit 1 [Jatropha curcas]
19 Hb_004182_050 0.1126203756 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X2 [Jatropha curcas]
20 Hb_005656_040 0.1132045071 desease resistance Gene Name: T2SE ATP-dependent RNA helicase, putative [Ricinus communis]

Gene co-expression network

sample Hb_006637_020 Hb_006637_020 Hb_000723_220 Hb_000723_220 Hb_006637_020--Hb_000723_220 Hb_002311_100 Hb_002311_100 Hb_006637_020--Hb_002311_100 Hb_000696_050 Hb_000696_050 Hb_006637_020--Hb_000696_050 Hb_001195_470 Hb_001195_470 Hb_006637_020--Hb_001195_470 Hb_004410_050 Hb_004410_050 Hb_006637_020--Hb_004410_050 Hb_000757_100 Hb_000757_100 Hb_006637_020--Hb_000757_100 Hb_000230_260 Hb_000230_260 Hb_000723_220--Hb_000230_260 Hb_017358_040 Hb_017358_040 Hb_000723_220--Hb_017358_040 Hb_000723_220--Hb_001195_470 Hb_085781_020 Hb_085781_020 Hb_000723_220--Hb_085781_020 Hb_071130_010 Hb_071130_010 Hb_000723_220--Hb_071130_010 Hb_005656_040 Hb_005656_040 Hb_002311_100--Hb_005656_040 Hb_000556_220 Hb_000556_220 Hb_002311_100--Hb_000556_220 Hb_002311_100--Hb_000723_220 Hb_000094_310 Hb_000094_310 Hb_002311_100--Hb_000094_310 Hb_009898_010 Hb_009898_010 Hb_002311_100--Hb_009898_010 Hb_002311_100--Hb_000696_050 Hb_012395_140 Hb_012395_140 Hb_000696_050--Hb_012395_140 Hb_000696_050--Hb_000094_310 Hb_004182_050 Hb_004182_050 Hb_000696_050--Hb_004182_050 Hb_000696_050--Hb_000723_220 Hb_001550_060 Hb_001550_060 Hb_000696_050--Hb_001550_060 Hb_000213_010 Hb_000213_010 Hb_000696_050--Hb_000213_010 Hb_004019_120 Hb_004019_120 Hb_001195_470--Hb_004019_120 Hb_000680_110 Hb_000680_110 Hb_001195_470--Hb_000680_110 Hb_003417_010 Hb_003417_010 Hb_001195_470--Hb_003417_010 Hb_001821_150 Hb_001821_150 Hb_001195_470--Hb_001821_150 Hb_004531_120 Hb_004531_120 Hb_001195_470--Hb_004531_120 Hb_004410_050--Hb_000723_220 Hb_004410_050--Hb_000556_220 Hb_004410_050--Hb_001195_470 Hb_004410_050--Hb_000696_050 Hb_140627_020 Hb_140627_020 Hb_004410_050--Hb_140627_020 Hb_004410_050--Hb_000680_110 Hb_024074_040 Hb_024074_040 Hb_000757_100--Hb_024074_040 Hb_010697_040 Hb_010697_040 Hb_000757_100--Hb_010697_040 Hb_002400_460 Hb_002400_460 Hb_000757_100--Hb_002400_460 Hb_002454_020 Hb_002454_020 Hb_000757_100--Hb_002454_020 Hb_003430_060 Hb_003430_060 Hb_000757_100--Hb_003430_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.88451 17.0475 2.53022 16.9674 11.1003 14.0895
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.38234 5.94674 9.65902 10.9812 14.6039

CAGE analysis