Hb_002454_020

Information

Type transcription factor
Description TF Family: HB
Location Contig2454: 33330-39695
Sequence    

Annotation

kegg
ID vvi:100266680
description BEL1-like homeodomain protein 9
nr
ID XP_010654234.1
description PREDICTED: BEL1-like homeodomain protein 9 [Vitis vinifera]
swissprot
ID Q9LZM8
description BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana GN=BLH9 PE=1 SV=1
trembl
ID F6HL25
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g01290 PE=4 SV=1
Gene Ontology
ID GO:0005634
description bel1-like homeodomain protein 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25583: 32968-39579
cDNA
(Sanger)
(ID:Location)		 013_M02.ab1: 32968-33688 , 022_G06.ab1: 32973-33256

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002454_020 0.0 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 9 [Vitis vinifera]
2 Hb_001357_270 0.0874965835 - - PREDICTED: aspartic proteinase A1-like [Jatropha curcas]
3 Hb_000922_370 0.0986567238 - - PREDICTED: uncharacterized protein LOC105640366 [Jatropha curcas]
4 Hb_000318_510 0.1022502634 - - PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Jatropha curcas]
5 Hb_000347_180 0.1046841091 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
6 Hb_056196_050 0.1051043643 - - PREDICTED: nuclear poly(A) polymerase 4-like [Jatropha curcas]
7 Hb_000600_070 0.1053742544 - - PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]
8 Hb_004545_140 0.1087860524 - - hypothetical protein JCGZ_23405 [Jatropha curcas]
9 Hb_000780_220 0.1094722932 transcription factor TF Family: GRAS PREDICTED: scarecrow-like transcription factor PAT1 [Jatropha curcas]
10 Hb_000283_070 0.109914315 - - PREDICTED: T-complex protein 1 subunit delta [Jatropha curcas]
11 Hb_003531_060 0.1125060842 - - unnamed protein product [Coffea canephora]
12 Hb_000563_640 0.1134084901 - - PREDICTED: chaperone protein dnaJ 49 [Jatropha curcas]
13 Hb_003430_060 0.1136529165 - - PREDICTED: potassium transporter 23 isoform X2 [Elaeis guineensis]
14 Hb_017987_020 0.1142466024 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000574_070 0.1154905061 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Jatropha curcas]
16 Hb_009620_050 0.1158423422 - - PREDICTED: protein unc-45 homolog A [Jatropha curcas]
17 Hb_025194_040 0.1160617953 - - PREDICTED: uncharacterized protein LOC105644854 isoform X2 [Jatropha curcas]
18 Hb_000757_100 0.1179087419 - - SPla/RYanodine receptor domain-containing protein isoform 2 [Theobroma cacao]
19 Hb_000160_290 0.1180699363 - - unnamed protein product [Vitis vinifera]
20 Hb_003044_020 0.1183674162 - - PREDICTED: uncharacterized protein LOC105641479 [Jatropha curcas]

Gene co-expression network

sample Hb_002454_020 Hb_002454_020 Hb_001357_270 Hb_001357_270 Hb_002454_020--Hb_001357_270 Hb_000922_370 Hb_000922_370 Hb_002454_020--Hb_000922_370 Hb_000318_510 Hb_000318_510 Hb_002454_020--Hb_000318_510 Hb_000347_180 Hb_000347_180 Hb_002454_020--Hb_000347_180 Hb_056196_050 Hb_056196_050 Hb_002454_020--Hb_056196_050 Hb_000600_070 Hb_000600_070 Hb_002454_020--Hb_000600_070 Hb_000739_220 Hb_000739_220 Hb_001357_270--Hb_000739_220 Hb_001357_270--Hb_000600_070 Hb_000613_080 Hb_000613_080 Hb_001357_270--Hb_000613_080 Hb_000544_050 Hb_000544_050 Hb_001357_270--Hb_000544_050 Hb_000158_100 Hb_000158_100 Hb_001357_270--Hb_000158_100 Hb_003044_020 Hb_003044_020 Hb_000922_370--Hb_003044_020 Hb_007426_130 Hb_007426_130 Hb_000922_370--Hb_007426_130 Hb_002329_040 Hb_002329_040 Hb_000922_370--Hb_002329_040 Hb_003362_070 Hb_003362_070 Hb_000922_370--Hb_003362_070 Hb_002174_020 Hb_002174_020 Hb_000922_370--Hb_002174_020 Hb_000160_290 Hb_000160_290 Hb_000922_370--Hb_000160_290 Hb_000283_070 Hb_000283_070 Hb_000318_510--Hb_000283_070 Hb_001700_040 Hb_001700_040 Hb_000318_510--Hb_001700_040 Hb_001143_160 Hb_001143_160 Hb_000318_510--Hb_001143_160 Hb_007163_090 Hb_007163_090 Hb_000318_510--Hb_007163_090 Hb_000318_510--Hb_000347_180 Hb_004545_140 Hb_004545_140 Hb_000318_510--Hb_004545_140 Hb_000457_260 Hb_000457_260 Hb_000347_180--Hb_000457_260 Hb_001097_050 Hb_001097_050 Hb_000347_180--Hb_001097_050 Hb_123352_020 Hb_123352_020 Hb_000347_180--Hb_123352_020 Hb_002255_030 Hb_002255_030 Hb_000347_180--Hb_002255_030 Hb_004935_030 Hb_004935_030 Hb_000347_180--Hb_004935_030 Hb_001377_270 Hb_001377_270 Hb_000347_180--Hb_001377_270 Hb_056196_050--Hb_000160_290 Hb_000813_100 Hb_000813_100 Hb_056196_050--Hb_000813_100 Hb_003124_130 Hb_003124_130 Hb_056196_050--Hb_003124_130 Hb_000997_030 Hb_000997_030 Hb_056196_050--Hb_000997_030 Hb_010180_040 Hb_010180_040 Hb_056196_050--Hb_010180_040 Hb_005494_020 Hb_005494_020 Hb_056196_050--Hb_005494_020 Hb_009535_020 Hb_009535_020 Hb_000600_070--Hb_009535_020 Hb_000743_040 Hb_000743_040 Hb_000600_070--Hb_000743_040 Hb_000347_130 Hb_000347_130 Hb_000600_070--Hb_000347_130 Hb_000567_050 Hb_000567_050 Hb_000600_070--Hb_000567_050 Hb_003428_070 Hb_003428_070 Hb_000600_070--Hb_003428_070 Hb_000023_190 Hb_000023_190 Hb_000600_070--Hb_000023_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.4921 27.2234 4.18918 23.3444 25.5225 34.976
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.6421 6.44115 21.357 15.797 13.9564

CAGE analysis