Hb_001357_270

Information

Type -
Description -
Location Contig1357: 210455-216134
Sequence    

Annotation

kegg
ID rcu:RCOM_1303660
description Aspartic proteinase precursor, putative (EC:3.4.23.40)
nr
ID XP_012070867.1
description PREDICTED: aspartic proteinase A1-like [Jatropha curcas]
swissprot
ID O65390
description Aspartic proteinase A1 OS=Arabidopsis thaliana GN=APA1 PE=1 SV=1
trembl
ID A0A067L506
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00916 PE=3 SV=1
Gene Ontology
ID GO:0004190
description aspartic proteinase a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09935: 210609-216061
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001357_270 0.0 - - PREDICTED: aspartic proteinase A1-like [Jatropha curcas]
2 Hb_002454_020 0.0874965835 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 9 [Vitis vinifera]
3 Hb_000739_220 0.0957008708 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Jatropha curcas]
4 Hb_000600_070 0.0962587188 - - PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]
5 Hb_000613_080 0.0970527493 - - PREDICTED: mucin-5AC-like [Nicotiana sylvestris]
6 Hb_000544_050 0.1027888852 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
7 Hb_000158_100 0.1047634696 - - conserved hypothetical protein [Ricinus communis]
8 Hb_011716_020 0.1059579145 - - PREDICTED: uncharacterized protein LOC105637783 [Jatropha curcas]
9 Hb_000574_070 0.1067379002 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Jatropha curcas]
10 Hb_006132_100 0.1117188533 - - PREDICTED: uncharacterized protein LOC105642968 [Jatropha curcas]
11 Hb_058643_010 0.1120976971 - - hydrolase, putative [Ricinus communis]
12 Hb_003044_020 0.1126403648 - - PREDICTED: uncharacterized protein LOC105641479 [Jatropha curcas]
13 Hb_000922_370 0.1132155159 - - PREDICTED: uncharacterized protein LOC105640366 [Jatropha curcas]
14 Hb_001860_040 0.1152593805 - - PREDICTED: cleavage stimulation factor subunit 77 isoform X4 [Jatropha curcas]
15 Hb_000608_320 0.1158532192 - - PREDICTED: uncharacterized protein LOC105644891 [Jatropha curcas]
16 Hb_017987_020 0.1160702123 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002974_060 0.1172637517 - - PREDICTED: transcription initiation factor TFIID subunit 15b isoform X2 [Jatropha curcas]
18 Hb_000318_510 0.1173684388 - - PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Jatropha curcas]
19 Hb_010417_050 0.1178495929 - - PREDICTED: uncharacterized protein LOC105645746 [Jatropha curcas]
20 Hb_000347_130 0.1182794132 - - PREDICTED: nuclear pore complex protein NUP107 [Jatropha curcas]

Gene co-expression network

sample Hb_001357_270 Hb_001357_270 Hb_002454_020 Hb_002454_020 Hb_001357_270--Hb_002454_020 Hb_000739_220 Hb_000739_220 Hb_001357_270--Hb_000739_220 Hb_000600_070 Hb_000600_070 Hb_001357_270--Hb_000600_070 Hb_000613_080 Hb_000613_080 Hb_001357_270--Hb_000613_080 Hb_000544_050 Hb_000544_050 Hb_001357_270--Hb_000544_050 Hb_000158_100 Hb_000158_100 Hb_001357_270--Hb_000158_100 Hb_000922_370 Hb_000922_370 Hb_002454_020--Hb_000922_370 Hb_000318_510 Hb_000318_510 Hb_002454_020--Hb_000318_510 Hb_000347_180 Hb_000347_180 Hb_002454_020--Hb_000347_180 Hb_056196_050 Hb_056196_050 Hb_002454_020--Hb_056196_050 Hb_002454_020--Hb_000600_070 Hb_000743_050 Hb_000743_050 Hb_000739_220--Hb_000743_050 Hb_000347_130 Hb_000347_130 Hb_000739_220--Hb_000347_130 Hb_025012_010 Hb_025012_010 Hb_000739_220--Hb_025012_010 Hb_000739_220--Hb_000158_100 Hb_001322_210 Hb_001322_210 Hb_000739_220--Hb_001322_210 Hb_000739_220--Hb_000613_080 Hb_009535_020 Hb_009535_020 Hb_000600_070--Hb_009535_020 Hb_000743_040 Hb_000743_040 Hb_000600_070--Hb_000743_040 Hb_000600_070--Hb_000347_130 Hb_000567_050 Hb_000567_050 Hb_000600_070--Hb_000567_050 Hb_003428_070 Hb_003428_070 Hb_000600_070--Hb_003428_070 Hb_000023_190 Hb_000023_190 Hb_000600_070--Hb_000023_190 Hb_001617_060 Hb_001617_060 Hb_000613_080--Hb_001617_060 Hb_003966_030 Hb_003966_030 Hb_000613_080--Hb_003966_030 Hb_174821_010 Hb_174821_010 Hb_000613_080--Hb_174821_010 Hb_003449_070 Hb_003449_070 Hb_000613_080--Hb_003449_070 Hb_003044_020 Hb_003044_020 Hb_000613_080--Hb_003044_020 Hb_000613_080--Hb_000922_370 Hb_000574_070 Hb_000574_070 Hb_000544_050--Hb_000574_070 Hb_085781_020 Hb_085781_020 Hb_000544_050--Hb_085781_020 Hb_001913_060 Hb_001913_060 Hb_000544_050--Hb_001913_060 Hb_003060_060 Hb_003060_060 Hb_000544_050--Hb_003060_060 Hb_000723_220 Hb_000723_220 Hb_000544_050--Hb_000723_220 Hb_000158_100--Hb_000743_050 Hb_003623_030 Hb_003623_030 Hb_000158_100--Hb_003623_030 Hb_000136_060 Hb_000136_060 Hb_000158_100--Hb_000136_060 Hb_002028_170 Hb_002028_170 Hb_000158_100--Hb_002028_170 Hb_001900_110 Hb_001900_110 Hb_000158_100--Hb_001900_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
52.8908 76.7759 12.6488 75.9644 99.401 134.061
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
48.0677 23.1514 58.6086 73.6419 43.3732

CAGE analysis