Hb_043362_010

Information

Type -
Description -
Location Contig43362: 8115-13398
Sequence    

Annotation

kegg
ID rcu:RCOM_0574890
description hypothetical protein
nr
ID KDP42823.1
description hypothetical protein JCGZ_23765 [Jatropha curcas]
swissprot
ID F4K4R6
description Protein GAMETE EXPRESSED 2 OS=Arabidopsis thaliana GN=GEX2 PE=2 SV=1
trembl
ID A0A067L6I2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23765 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_043362_010 0.0 - - hypothetical protein JCGZ_23765 [Jatropha curcas]
2 Hb_002960_080 0.0543693125 transcription factor TF Family: IWS1 PREDICTED: uncharacterized protein LOC105635322 [Jatropha curcas]
3 Hb_001188_020 0.0651560082 - - PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X1 [Jatropha curcas]
4 Hb_002007_110 0.0687755259 transcription factor TF Family: Jumonji PREDICTED: lysine-specific demethylase JMJ25 isoform X2 [Jatropha curcas]
5 Hb_003912_070 0.0720006645 - - PREDICTED: nuclear pore complex protein NUP85 [Jatropha curcas]
6 Hb_003581_170 0.075648611 - - PREDICTED: alpha-amylase 3, chloroplastic [Jatropha curcas]
7 Hb_003805_040 0.0785618789 - - Sacsin [Glycine soja]
8 Hb_000479_240 0.0803313989 - - PREDICTED: probable ubiquitin conjugation factor E4 isoform X2 [Jatropha curcas]
9 Hb_011849_040 0.082437093 - - ubiquitin-protein ligase, putative [Ricinus communis]
10 Hb_005832_010 0.0839280287 - - PREDICTED: enhancer of mRNA-decapping protein 4 isoform X1 [Jatropha curcas]
11 Hb_000331_580 0.0840270972 - - PREDICTED: programmed cell death protein 4-like [Jatropha curcas]
12 Hb_000665_230 0.0848431357 - - PREDICTED: uncharacterized protein LOC105637615 [Jatropha curcas]
13 Hb_005568_040 0.0862450904 - - PREDICTED: uncharacterized protein LOC105628163 isoform X2 [Jatropha curcas]
14 Hb_079326_020 0.0883741634 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005215_010 0.0898376203 - - PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Jatropha curcas]
16 Hb_001904_030 0.0900249102 - - PREDICTED: importin-5 [Jatropha curcas]
17 Hb_159558_010 0.0907652837 - - PREDICTED: uncharacterized protein LOC105635846 [Jatropha curcas]
18 Hb_000008_240 0.0909586681 - - conserved hypothetical protein [Ricinus communis]
19 Hb_012092_060 0.0909766801 - - PREDICTED: KH domain-containing protein At4g18375 [Jatropha curcas]
20 Hb_000066_150 0.0910195904 desease resistance Gene Name: NB-ARC hypothetical protein POPTR_0004s20690g [Populus trichocarpa]

Gene co-expression network

sample Hb_043362_010 Hb_043362_010 Hb_002960_080 Hb_002960_080 Hb_043362_010--Hb_002960_080 Hb_001188_020 Hb_001188_020 Hb_043362_010--Hb_001188_020 Hb_002007_110 Hb_002007_110 Hb_043362_010--Hb_002007_110 Hb_003912_070 Hb_003912_070 Hb_043362_010--Hb_003912_070 Hb_003581_170 Hb_003581_170 Hb_043362_010--Hb_003581_170 Hb_003805_040 Hb_003805_040 Hb_043362_010--Hb_003805_040 Hb_079326_020 Hb_079326_020 Hb_002960_080--Hb_079326_020 Hb_011849_040 Hb_011849_040 Hb_002960_080--Hb_011849_040 Hb_000069_470 Hb_000069_470 Hb_002960_080--Hb_000069_470 Hb_002960_080--Hb_001188_020 Hb_002960_080--Hb_003581_170 Hb_002639_080 Hb_002639_080 Hb_001188_020--Hb_002639_080 Hb_005656_040 Hb_005656_040 Hb_001188_020--Hb_005656_040 Hb_071130_010 Hb_071130_010 Hb_001188_020--Hb_071130_010 Hb_007994_010 Hb_007994_010 Hb_001188_020--Hb_007994_010 Hb_000537_050 Hb_000537_050 Hb_001188_020--Hb_000537_050 Hb_012055_110 Hb_012055_110 Hb_002007_110--Hb_012055_110 Hb_123531_010 Hb_123531_010 Hb_002007_110--Hb_123531_010 Hb_005832_010 Hb_005832_010 Hb_002007_110--Hb_005832_010 Hb_000331_580 Hb_000331_580 Hb_002007_110--Hb_000331_580 Hb_000066_150 Hb_000066_150 Hb_002007_110--Hb_000066_150 Hb_006031_010 Hb_006031_010 Hb_002007_110--Hb_006031_010 Hb_012092_060 Hb_012092_060 Hb_003912_070--Hb_012092_060 Hb_005568_040 Hb_005568_040 Hb_003912_070--Hb_005568_040 Hb_011287_050 Hb_011287_050 Hb_003912_070--Hb_011287_050 Hb_003912_070--Hb_000331_580 Hb_000479_240 Hb_000479_240 Hb_003912_070--Hb_000479_240 Hb_000105_040 Hb_000105_040 Hb_003581_170--Hb_000105_040 Hb_000176_100 Hb_000176_100 Hb_003581_170--Hb_000176_100 Hb_000949_010 Hb_000949_010 Hb_003581_170--Hb_000949_010 Hb_001699_280 Hb_001699_280 Hb_003581_170--Hb_001699_280 Hb_011242_060 Hb_011242_060 Hb_003581_170--Hb_011242_060 Hb_000836_020 Hb_000836_020 Hb_003581_170--Hb_000836_020 Hb_009486_170 Hb_009486_170 Hb_003805_040--Hb_009486_170 Hb_000665_230 Hb_000665_230 Hb_003805_040--Hb_000665_230 Hb_001133_030 Hb_001133_030 Hb_003805_040--Hb_001133_030 Hb_008053_040 Hb_008053_040 Hb_003805_040--Hb_008053_040 Hb_011202_020 Hb_011202_020 Hb_003805_040--Hb_011202_020 Hb_002521_020 Hb_002521_020 Hb_003805_040--Hb_002521_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.379465 1.23333 0.546064 0.76332 0.700884 1.01492
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.513862 0.303198 0.474258 0.75666 0.950478

CAGE analysis