Hb_011287_050

Information

Type -
Description -
Location Contig11287: 39344-40431
Sequence    

Annotation

kegg
ID rcu:RCOM_1080950
description hypothetical protein
nr
ID XP_012085647.1
description PREDICTED: uncharacterized protein LOC105644786 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JSD2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17935 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03888: 39299-58827
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011287_050 0.0 - - PREDICTED: uncharacterized protein LOC105644786 [Jatropha curcas]
2 Hb_001105_160 0.057380786 - - PREDICTED: protein phosphatase 2C 32 [Jatropha curcas]
3 Hb_003912_070 0.0574799049 - - PREDICTED: nuclear pore complex protein NUP85 [Jatropha curcas]
4 Hb_005568_040 0.0682496991 - - PREDICTED: uncharacterized protein LOC105628163 isoform X2 [Jatropha curcas]
5 Hb_012092_060 0.0683237017 - - PREDICTED: KH domain-containing protein At4g18375 [Jatropha curcas]
6 Hb_061878_010 0.0802737608 - - hypothetical protein CISIN_1g0094072mg, partial [Citrus sinensis]
7 Hb_000487_380 0.0820054527 - - PREDICTED: protein PAT1 homolog 1 isoform X1 [Jatropha curcas]
8 Hb_000331_580 0.0869142731 - - PREDICTED: programmed cell death protein 4-like [Jatropha curcas]
9 Hb_006573_210 0.0869183923 - - PREDICTED: protein SGT1 homolog [Jatropha curcas]
10 Hb_004645_070 0.0876746004 - - PREDICTED: beta-1,3-galactosyltransferase 15 [Jatropha curcas]
11 Hb_004586_290 0.0877931252 - - PREDICTED: transport inhibitor response 1-like protein [Jatropha curcas]
12 Hb_001167_050 0.0889051654 - - PREDICTED: uncharacterized protein LOC105648014 [Jatropha curcas]
13 Hb_000406_110 0.0895472774 - - PREDICTED: transmembrane protein adipocyte-associated 1 [Jatropha curcas]
14 Hb_000059_020 0.089809793 - - PREDICTED: F-box protein SKP2A [Jatropha curcas]
15 Hb_032808_030 0.092193531 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
16 Hb_000479_240 0.0927320755 - - PREDICTED: probable ubiquitin conjugation factor E4 isoform X2 [Jatropha curcas]
17 Hb_003177_060 0.0935885831 - - PREDICTED: 5'-3' exoribonuclease 3 isoform X1 [Jatropha curcas]
18 Hb_002284_250 0.0955761286 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
19 Hb_000069_410 0.097382387 - - PREDICTED: protein SDE2 homolog [Jatropha curcas]
20 Hb_000037_220 0.0978770158 - - PREDICTED: vacuolar protein-sorting-associated protein 11 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_011287_050 Hb_011287_050 Hb_001105_160 Hb_001105_160 Hb_011287_050--Hb_001105_160 Hb_003912_070 Hb_003912_070 Hb_011287_050--Hb_003912_070 Hb_005568_040 Hb_005568_040 Hb_011287_050--Hb_005568_040 Hb_012092_060 Hb_012092_060 Hb_011287_050--Hb_012092_060 Hb_061878_010 Hb_061878_010 Hb_011287_050--Hb_061878_010 Hb_000487_380 Hb_000487_380 Hb_011287_050--Hb_000487_380 Hb_041327_010 Hb_041327_010 Hb_001105_160--Hb_041327_010 Hb_001105_160--Hb_005568_040 Hb_001105_160--Hb_012092_060 Hb_071130_010 Hb_071130_010 Hb_001105_160--Hb_071130_010 Hb_010809_010 Hb_010809_010 Hb_001105_160--Hb_010809_010 Hb_003912_070--Hb_012092_060 Hb_003912_070--Hb_005568_040 Hb_000331_580 Hb_000331_580 Hb_003912_070--Hb_000331_580 Hb_043362_010 Hb_043362_010 Hb_003912_070--Hb_043362_010 Hb_000479_240 Hb_000479_240 Hb_003912_070--Hb_000479_240 Hb_005568_040--Hb_000479_240 Hb_004645_070 Hb_004645_070 Hb_005568_040--Hb_004645_070 Hb_005568_040--Hb_000331_580 Hb_000008_240 Hb_000008_240 Hb_005568_040--Hb_000008_240 Hb_004586_290 Hb_004586_290 Hb_005568_040--Hb_004586_290 Hb_000537_050 Hb_000537_050 Hb_012092_060--Hb_000537_050 Hb_012092_060--Hb_005568_040 Hb_012286_040 Hb_012286_040 Hb_012092_060--Hb_012286_040 Hb_000003_100 Hb_000003_100 Hb_012092_060--Hb_000003_100 Hb_140049_080 Hb_140049_080 Hb_061878_010--Hb_140049_080 Hb_006355_090 Hb_006355_090 Hb_061878_010--Hb_006355_090 Hb_004109_370 Hb_004109_370 Hb_061878_010--Hb_004109_370 Hb_000139_130 Hb_000139_130 Hb_061878_010--Hb_000139_130 Hb_061878_010--Hb_012092_060 Hb_000037_220 Hb_000037_220 Hb_061878_010--Hb_000037_220 Hb_002046_020 Hb_002046_020 Hb_000487_380--Hb_002046_020 Hb_000487_380--Hb_004586_290 Hb_011242_060 Hb_011242_060 Hb_000487_380--Hb_011242_060 Hb_003078_020 Hb_003078_020 Hb_000487_380--Hb_003078_020 Hb_000487_380--Hb_005568_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.0571 33.5919 12.1581 23.8442 13.8914 23.7295
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.1687 6.32551 12.691 28.7506 14.335

CAGE analysis